Gene RPD_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1313 
Symbol 
ID4021790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1476458 
End bp1477066 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content69% 
IMG OID637961506 
Productphosphoglycerate mutase 
Protein accessionYP_568452 
Protein GI91975793 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACAGGC TGATCATGCC CACCATCTAC TACATCCGCC ACGGCCAGAC CGACTGGAAC 
GCCACCGGTC GATTTCAGGG CACGCAGGAC ATTCCGCTGA ACGACATCGG GCGCGCGCAG
GCCAGCGCGG CCGGCCAACT GCTGCGCGAT CTGCTGACCC GCGACGGCCG CGACGCCGCG
AGCCTGTCCT ATGTCGCGAG CCCGCTCAGC CGCGCTCGCG TCACCATGGA GCTGCTGCGC
GTTGCGCTCG GCCTGCCGGC GGAGGATTAC ACCACCGACG ACCGGCTGCG CGAGATCACC
TACGGCGCCT GGGAGGGGTT CACGCTGGCG CAGATGGAGC AGTCCAACTC GGAAATCCAC
GCCGCACGTC TGGCCGATCG CTGGGCCGTG GCGCCCCTGC GCGGCGAGAG CTACGCCGAC
CGGCTGCCCT TTATCGCCGA CTGGACCGGC GCGTTGACAA ACGACACGGT GGCGGTTGGC
CATGTCGGCA CCGCGCGGAC GCTGATGGTG GCGCTCGGCC TGAAATCGCC GGCGGAGGCG
TTGGAAGGGC TGATCGAGCA GGGCGCACTC TATGTGTTCC GCGACGGCGG GCTGACGATC
GTGCGCTGA
 
Protein sequence
MHRLIMPTIY YIRHGQTDWN ATGRFQGTQD IPLNDIGRAQ ASAAGQLLRD LLTRDGRDAA 
SLSYVASPLS RARVTMELLR VALGLPAEDY TTDDRLREIT YGAWEGFTLA QMEQSNSEIH
AARLADRWAV APLRGESYAD RLPFIADWTG ALTNDTVAVG HVGTARTLMV ALGLKSPAEA
LEGLIEQGAL YVFRDGGLTI VR