Gene RPD_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1309 
Symbol 
ID4021786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1472809 
End bp1473780 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content67% 
IMG OID637961502 
Productchaperone DnaJ-like 
Protein accessionYP_568448 
Protein GI91975789 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACC CCTATGAGGT CCTGGGGGTG CAGCGGGACG CCAGCGCTGC GGCGATCAAG 
AGCGCCTATC GCAAGCTGGC CAAGAAGCAT CACCCCGACG CCAACAAGAA CGATCCGAAG
GCTGCTGCCC GCTTCGCCGA AGTCAATTCC GCCAACGAGA TCGTCGGCGA CGAGACCAAA
CGCAAACAGT TCGACCGAGG CGAGATCGAC GCCGAGGGCA AGCCGCGCTT CCAGGGCTTT
CCCGGCGGCG GACGCGGTGG GCGTGCAGGC GGGCCCGGCG GTGGCTTCGA GCACAATTTC
CGTGGCGGTG GCGGCGGCGG ATTCGCTGGC GCGGGCGGCG CAGGCTTCGA GGACATTCTG
AACTCGATGT TCGGTGGTGC GGCCGGCATG CGCGGCGGCC CGCGCGGCGG GCCCCAGGGG
TTCGATTTCG ACACCGGCGG CTTCGCTCCC GATCTCGACC AGACCGTCGC GATGACGGTG
ACGCTGGAAG AGGCGGCCCA AGGCACCGAG AAGCGCGTCC GGCTGCCGAC CGGCAAAGAG
CTCAACGTCA AGATTCCGGC TGGCGTCAGT TCGGGCCAGC AGATCCGGCT GAAAGGGCAG
GGCGATAGCG CCCCCGGCCA TCGCGCCGGC GATCTGCTGA TCACCGTCAA CTACGCCCCG
CATCCGCACT TCAAGGTCGA GGGCACTGAT CTGCGGCTGG AGCTGCCGAT CACGCTGTAT
GAGGCGGTGC TCGGCGCCAA GGTTCGCGTC CCGACGCTGA CCGGCGCAAT CGAACTGTCG
ATCCCGAAGA ACACCTCGAG CGGGAGAACC TTCCGGCTCA AGGGCAAGGG GTTGCTGAAG
AACGGCGCGA CCGGCGACCT GTTCGTCACC ACGCGGATCA CGCTGCCGGA CGGCCACGAT
GCCGAGCTCG AGGCGCTGAT GCAGAAATGG CGCGACGGCC ATCCGTATCA CCCGCGCAGC
GACCTCAAAT AA
 
Protein sequence
MRDPYEVLGV QRDASAAAIK SAYRKLAKKH HPDANKNDPK AAARFAEVNS ANEIVGDETK 
RKQFDRGEID AEGKPRFQGF PGGGRGGRAG GPGGGFEHNF RGGGGGGFAG AGGAGFEDIL
NSMFGGAAGM RGGPRGGPQG FDFDTGGFAP DLDQTVAMTV TLEEAAQGTE KRVRLPTGKE
LNVKIPAGVS SGQQIRLKGQ GDSAPGHRAG DLLITVNYAP HPHFKVEGTD LRLELPITLY
EAVLGAKVRV PTLTGAIELS IPKNTSSGRT FRLKGKGLLK NGATGDLFVT TRITLPDGHD
AELEALMQKW RDGHPYHPRS DLK