Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1284 |
Symbol | |
ID | 4021761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1446976 |
End bp | 1447833 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961477 |
Product | hypothetical protein |
Protein accession | YP_568423 |
Protein GI | 91975764 |
COG category | [R] General function prediction only |
COG ID | [COG2961] Protein involved in catabolism of external DNA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0995661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTATC GCCATGCCTT CCACGCCGGC AATTTCGCCG ACGTCATCAA GCACATCGTC CTGGTCCGGA TCCTGACCTA TCTGCAGGAG AAGCCGGCGC CATTCCGGGT GATCGACAGC CATGCCGGCG CCGGGCTTTA TGACCTCACC GGCGAAGAAG CCATCCGCGG CGGCGAGTGG GCCTCGGGCA TCGCCCGGGT GCTGCAGGCT CGGTTCACCG ACGCCGCGGG CGACCTGATC AAGCCGTATC TCGACATCGT CCGCGCCTTC AACCCGCAGC GTGACCTGAC AGCCTATCCG GGATCACCGC TGATCGCCCG CGCCCTGCTG CGGCCGCAGG ACAGCATGGT CGCGAGCGAA CTGGAGCCGC TGGCGCGCAA GCAACTGATC AACGCGCTGC GCCGCGACAC CCAGGCCCGG GTGGTCGATC TCGACGGCTG GCAGGCGCTG ACGGCGTTCG TGCCGCCGAA AGAACGCCGC GGTCTGGTGC TGATCGATCC ATCGTTCGAA CAGAAGGACG AGTTCGAGCG ACTGGCCGCA GGCTTCAGCA CGGCTTACGC GAAATGGCCG ACCGGCACCT ATCAGTTGTG GTACCCAGCG AAAAATCGCC GCCTCACCGA GGCATTGGCC GACCACGTCG CAACCGTCGC CGCTGCGGGT GGCGAGGGAA AGTGTCTGCG GCTGGAATTC AGCGTCGCAC CGCAACAGCC GGACGGCGCA CTGACGTCGA CCGGTCTGCT GGTGGTGAAC CCGCCATGGA CGCTGGCGTC GGAGTTGAGA GTCATTCTCC CCGAATTGGA GAGACCGCTC GGCCAGGGCG GCGTCAGCCG CTATCGGCTC GAGCTACCCA GATCGTGA
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Protein sequence | MNYRHAFHAG NFADVIKHIV LVRILTYLQE KPAPFRVIDS HAGAGLYDLT GEEAIRGGEW ASGIARVLQA RFTDAAGDLI KPYLDIVRAF NPQRDLTAYP GSPLIARALL RPQDSMVASE LEPLARKQLI NALRRDTQAR VVDLDGWQAL TAFVPPKERR GLVLIDPSFE QKDEFERLAA GFSTAYAKWP TGTYQLWYPA KNRRLTEALA DHVATVAAAG GEGKCLRLEF SVAPQQPDGA LTSTGLLVVN PPWTLASELR VILPELERPL GQGGVSRYRL ELPRS
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