Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1201 |
Symbol | |
ID | 4021677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1359877 |
End bp | 1360836 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961393 |
Product | protein of unknown function, zinc metallopeptidase putative |
Protein accession | YP_568340 |
Protein GI | 91975681 |
COG category | [R] General function prediction only |
COG ID | [COG2321] Predicted metalloprotease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCGGA CGGCCCGCCG TCGTGAACCC GAGGAAAAGC TGATGCGTGA CGATGATTTC CGTCGCAGCG ACAACATTGA CGACCGGCGT GAAGGCGGCG GGGGCGGCGG CGGCGGCTTC GGATTTCCGA TGGGCGGCGG CGGCCTCGGC ATCGGCACCA TCGTCGTCCT CGGCCTGGTC GGATGGGCGT TCGGCATCGA CCCGCGCCTG CTGATCAGCG GCGCCGAAGT CCTGACCGGC GGTGCGCCGA CTCAACAGAG CGAGCGGGCG TCCCCCGGCA AGCAGGGCGC ACCGACCGAC GAAATGGGCA GCATGATTTC CGGCGTGCTC GGCGAGATCG ACGATCGCTG GACCGAGATC TTCAAGGCCA ACGGCCAGAC CTATGTCGGG CCGAGGATCG TGCTGTTCCG CAATTCCACC AATGGCGGCC GCTGCGGCAT GGCGCAATCG GCGATGGGGC CGTTCTATTG CCCGCCGGAC AAGCAGATCT ACATCGACAC CAATTTCTTC AAGCAGGTCG AGACGCGCTT CAAGGGCTGC TCCGGCAGCG CCTGCCGATT TACCGCAGCC TACATCATCG CCCATGAGGC GGGGCATCAC GTGCAGAACC TGCTGGGCAT CCTGCCGCGT GTGACGCGGC TGCAGGAGCA GGCGGGCTCC AAGAGCGAGT CCAATGCGTT GCAGGTCCGC GTCGAATTGC AGGCCGACTG CCTGTCGGGC GTCTGGGTCA ATCGCGAGCA GAAGAAGCGG CCGAACTTCC TCGAGGAAGG CGACATCGAC GCGGCCCTGA CCACGGCGAG CGCGATCGGC GACGACACGC TGCAGCGCAA AGCGGGCCGG GAAGTCGTGC CGGATTCCTT CACCCACGGT TCGGCCGAAC AGCGCAAGCG CTGGTTCATG ACCGGCTATC AGCAGGGCAC GGTGCAGGCG TGCAACACGT TCGCAGCCGA GAAGCTGTAA
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Protein sequence | MVRTARRREP EEKLMRDDDF RRSDNIDDRR EGGGGGGGGF GFPMGGGGLG IGTIVVLGLV GWAFGIDPRL LISGAEVLTG GAPTQQSERA SPGKQGAPTD EMGSMISGVL GEIDDRWTEI FKANGQTYVG PRIVLFRNST NGGRCGMAQS AMGPFYCPPD KQIYIDTNFF KQVETRFKGC SGSACRFTAA YIIAHEAGHH VQNLLGILPR VTRLQEQAGS KSESNALQVR VELQADCLSG VWVNREQKKR PNFLEEGDID AALTTASAIG DDTLQRKAGR EVVPDSFTHG SAEQRKRWFM TGYQQGTVQA CNTFAAEKL
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