Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1150 |
Symbol | |
ID | 4021626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1308158 |
End bp | 1308988 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961342 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_568289 |
Protein GI | 91975630 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.155338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGA TCAAGCGCTA TTTCCGCAGC CCTGCCGCCA TCGTCGGATT GATCTTGCTA TTGCTGGTGA TCGGGATGGC GATCAGCGCC GGCTGGTTGT ATCCGCGGGA TCCGTTGTCG CTCGCCGGCC GGCCGCTGAT CTGGCCGTTC TCCAATCCGC GCTTCCTGCT CGGCACCGAC AATTCCGGCC GCGACATCGC CGCGCAGATT TTCCACGGCG CACGGATCGC GCTGCTGATC GGCGGCGCGG CGACCGCGAT CGCGGTGCTG ATCGGCGTGC TGATCGGCGC CTTCGCCGGC TATTTCGGCG GATGGATCGA CACCGTGCTA ATGCGGATCA CCGAGGCGTT CCAGATCCTG CCGAACTTCG TGCTGCTGCT GGTGCTGGTC GCGGTGTTCG GCTCGACGCT GACCACGGTG ACGATCGCGG TCGGCATCGT GTCGTGGCCG GCGCCGGCGC GGCTGACCCG CGCCGAATTC CTGTCGCTGC GCAACCGCGA ATTCGTCCAG GCCGGACGCA CCCTCGGGAT GAAGGATTTG CAACTGATCC TCGGCGAGAT CCTGCCCAAC GCGCTGCCGC CGGTGATCGT CTATGCCAGC GTGGTGATGG CGGTCGCGAT CCTGCTGGAG AGCGCGCTGG CGTTTCTGCG GCTGTCCGAT CCCAACGTCG CATCGTGGGG CAATCTGATC GGGCTTGGCC GCGACGTGCT GCGCGTGCAG TGGTACGTCG CCGCGATCCC GGGTCTCGCG ATCCTGATCA CCGTGCTGGC GGTGTCGCTG GTCGGCCAGG GCCTCAACGA CGCGCTCAAT CCGAGGCTGA AGGGACGATG A
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Protein sequence | MDAIKRYFRS PAAIVGLILL LLVIGMAISA GWLYPRDPLS LAGRPLIWPF SNPRFLLGTD NSGRDIAAQI FHGARIALLI GGAATAIAVL IGVLIGAFAG YFGGWIDTVL MRITEAFQIL PNFVLLLVLV AVFGSTLTTV TIAVGIVSWP APARLTRAEF LSLRNREFVQ AGRTLGMKDL QLILGEILPN ALPPVIVYAS VVMAVAILLE SALAFLRLSD PNVASWGNLI GLGRDVLRVQ WYVAAIPGLA ILITVLAVSL VGQGLNDALN PRLKGR
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