Gene RPD_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1128 
Symbol 
ID4021604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1283590 
End bp1284795 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content70% 
IMG OID637961320 
Productacetate kinase 
Protein accessionYP_568267 
Protein GI91975608 
COG category[C] Energy production and conversion 
COG ID[COG0282] Acetate kinase 
TIGRFAM ID[TIGR00016] acetate kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.323074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TGCTGCTGGT GCTGAATGCC GGCTCCTCCA GCGTCAAATT CGCGTTGTAC 
GCGGCGCACG CCGAGCCGAC GGTGGAGCAA CTGATCTGCG AGGGCGGCAT CGGCAGCATC
GGTCATCGCC CGCATTTCAA GGTGGTGGAC CGCGATGGCG GGGTGGTGCA CGACGACTAT
CTGGCCGAGG GCGCCAGCCA TGACGACGCG ATCGCGACCC TGATCGGCTG GATCGAACAG
CGCTTTTCCG ATCAGCGGCT CGCCGCGGTC GGGCATCGTG TCGTGCATGG CGGCGACCTG
TTCGATGCTC CCGTTCGCAT CGATCCGGAC GTGGTCGCGA AGCTGCGCCG CTTCACCACG
CTGGCGCCGC TGCACCAGCC GCACAATATC GCCGCAATCG AGGCGCTGGC GAAGCAGCAC
CCGACGCTGC CGCAGGTCGC CTGTTTCGAC ACCGCCTTCC ACCATCGCCT GCCGCCGGTT
GCGACCTGGT TCGCGCTGCC GCGCGAGCTC ACCGCGCAGG GCATCCGCCG CTACGGCTTT
CACGGCATCT CCTACGAATA CATCGCCGGC GCGCTGCCGG GCGTGGCCGG CTCGGCGATC
GCCGATGGCC GCGTCGTGGT CGCGCATCTC GGCGCCGGCG CCAGCATGTG CGCGATGCGC
GCGCGCAAGA GCGTCGCGAC CACGATGGGC TTCACCGCGC TCGACGGCCT GATGATGGGC
AGCCGCACCG GCGTGCTCGA TCCCGGCGTG GTGCTGTATC TGCTCGAACA GAAGGGCATG
ACGCCCGCCG AGGTCAGCGA TCTGTTGTAT CGCCAGTCCG GCCTGCTGGG CGTCTCCGGA
ATCAGCGACG ACATGCGGAC GCTGCTGGCC AGCGACGACC CGCGCGCCGA GGAAGCCGTC
GCGCTGTTCG TCTATCGCAT CGGCCGCGAA CTCGGCTCGC TCGCCGCCGC GCTCGGCGGC
CTCGACGCGC TGGTGTTCAC CGGCGGGATC GGCGAGCACG CTGCGGAGAT TCGCCGGAGG
GTGTGCAAGC AGGCGGGCTG GCTCGGCGTG ACGCTCGACG CCGCCGCCAA TGCGCAAGCC
TGCGGCGCGG CGCGGATCAG CATCGCCGAC AGCAAGGTCT CGGCCTGGGT GATCCCGACC
GACGAGGACC TGATGATCGC CCGCCATGTC TGGCGGCTGG TCGAGGGCGG CCGGACCGCC
GACTGA
 
Protein sequence
MSDMLLVLNA GSSSVKFALY AAHAEPTVEQ LICEGGIGSI GHRPHFKVVD RDGGVVHDDY 
LAEGASHDDA IATLIGWIEQ RFSDQRLAAV GHRVVHGGDL FDAPVRIDPD VVAKLRRFTT
LAPLHQPHNI AAIEALAKQH PTLPQVACFD TAFHHRLPPV ATWFALPREL TAQGIRRYGF
HGISYEYIAG ALPGVAGSAI ADGRVVVAHL GAGASMCAMR ARKSVATTMG FTALDGLMMG
SRTGVLDPGV VLYLLEQKGM TPAEVSDLLY RQSGLLGVSG ISDDMRTLLA SDDPRAEEAV
ALFVYRIGRE LGSLAAALGG LDALVFTGGI GEHAAEIRRR VCKQAGWLGV TLDAAANAQA
CGAARISIAD SKVSAWVIPT DEDLMIARHV WRLVEGGRTA D