Gene RPD_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1072 
Symbol 
ID4021548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1222614 
End bp1223516 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID637961264 
Producthypothetical protein 
Protein accessionYP_568211 
Protein GI91975552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCCC AACTGCTCGA GGACGTTGCC GCAGGTTTCG CGCAGGCGAA GGTCATTCCC 
TATCTCGGCT GCGGCGCGCT CGCGCTCGGC GGCGGGAGCG GCCCGATTCC CGCGTCGCCG
ATCGAATTGG TTGCGCGTCT GACCGCGAAG ACGACGGTGC CGCACAAGGT TCGCACCAAT
CTCACCGGCG CGGCGCAGTA CATCGAGAAT TTCAAGCATC GCAAGACGCT GTCGTCGCTG
ATGTCGGAAG CATTCCGCGC TTCGGCCGCG CCGAACGACC TGCACAACAT GCTGGCGGCT
CTCCCCAAGC TGCCGCTGCT GGTCCATGCC TGGTACGACG ACGTGCCGCA ACGAGCGTTC
GCGGGCCGCG CCGATTGGGG CATGGCGCAG GGCGTCAGCC AGACCGAGCA TCACGGTCGA
TGGGTGAATT ACTATCGCCC CGACGGCAGC GAAGTGACCG AACCAGATCC GAGCGTCGTC
GCCGATGAAA TGCCGTTGTT CGCGGCGACG CCGGACGAGG CGCGCGCCTG GGCGACGCTG
TTGTATCAGC CTCTGGGCTC GGTCGCGCCG GCCGCGAACT ATCTGGTGTC CGACAGCGAC
TTTGTCGAAG TCCTGACCGA GATCGACATC CAGACGCCGA TTCCGCTGTC GGTCCAGGAA
CTGCGGCGCG ATCGGCATTT CCTGTTCCTC GGTTGCCGCT TCGACAACCA GCTTGATCGT
TTGTTCGCAC GCCAGATCAT GAAGCGCTCG TCCGCGCGGC ACTGGGCGGT ACTGCCCGAC
ACGCTGACCC GCAACGAAGA GCGCTTCCTC GAAGAGCAGA ACATCCAGCG GATCGAATGG
CCGCTGTCGA AGTTCGTTGC GGCTCTTGCC CCGATGCTGC AGGGCCAGAG CCTGCCGGCC
TAG
 
Protein sequence
MPAQLLEDVA AGFAQAKVIP YLGCGALALG GGSGPIPASP IELVARLTAK TTVPHKVRTN 
LTGAAQYIEN FKHRKTLSSL MSEAFRASAA PNDLHNMLAA LPKLPLLVHA WYDDVPQRAF
AGRADWGMAQ GVSQTEHHGR WVNYYRPDGS EVTEPDPSVV ADEMPLFAAT PDEARAWATL
LYQPLGSVAP AANYLVSDSD FVEVLTEIDI QTPIPLSVQE LRRDRHFLFL GCRFDNQLDR
LFARQIMKRS SARHWAVLPD TLTRNEERFL EEQNIQRIEW PLSKFVAALA PMLQGQSLPA