Gene RPD_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1016 
Symbol 
ID4021491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1155262 
End bp1155477 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content66% 
IMG OID637961207 
Producthypothetical protein 
Protein accessionYP_568155 
Protein GI91975496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.698133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.349363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG CACTGTCGAT CAGAAGTAAT TTCGCTGATC CCGACGCCGC CTACCGGATG 
ATCGTCGAGG CGCATCGCGG CGTCAGCGAC GAGCAGAGCG CGGCGCTCGA CGCGGCGCTG
GTGCTGATCC TCGCCAACCA CATCGGCGAT CTCGATCTGC TGCGCGAGGC GGTGACGCTG
GCGAAGCGGA GCGTGGTGAG TGAAGGGCAG GGGTGA
 
Protein sequence
MTAALSIRSN FADPDAAYRM IVEAHRGVSD EQSAALDAAL VLILANHIGD LDLLREAVTL 
AKRSVVSEGQ G