Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0999 |
Symbol | |
ID | 4021474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1129029 |
End bp | 1129943 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961190 |
Product | extracellular solute-binding protein |
Protein accession | YP_568138 |
Protein GI | 91975479 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.584157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCAT GGATTGAGTC ATTCTTCAAC GGCCGATCGG CCGTCTTGCG CGCTTTGGCG CTGGCGATCT TCTGCGCCCT GTTGCCGTTG ACGCATGATG CGCGCGCGGC CGAGACCGAG GCGGAAGCGA AGGCCGCCGC GGCTGCGACG GCTCATGCGG TGCCGGGCTT CTGGGATCCG CGACGGCGGC CGGAGCGGCC GGATCTGTCT CGTCTCACCG TGATCCGGTT CCTCACCGAG ACCGACTATC CGCCGTTCAA CTTCACCGGC GCCGACGGCA ATCCGGCCGG CTTCAACGTC GATCTGGCGC GCGCCCTGTG CGAGGAGATC AAGGTCACCT GCACCGTGCA GATGCGACGG TTCGAGACGC TGCTCGACGC GCTGGCGAGC AATCGCGGCG ACGCCATCAT CGCCTCGCTG GCGGTGACGC CGCAGACCCG CGGCAAGGTC GACTTCACCG ATTCGTACTA CCGCGCCCCC GGCCGCTTCG CCGCCCGCAA GGATGCGGTG ATGCCTGAGA TCCGCCCGGA ATATCTCGAG GGCAAGAAGG TCGGCGCGAT CGCAGGCTCG GCGCATGAGG CCTATCTCAA GGCGATGTTC ACCGACGCCG AGCTGCATTC CTACCCGAAC GACGAGGCGC TCCGGGCCGC CGTGAAGCGC GGCGAGGTCG ATTTCATCTT CGGCGATTCG ATCTCGCTGG CGTTCTGGAT CAACGGCACC GATTCCGAAA ATTGCTGCGC CTTCTCGGGC GGCCCCTTCA CCGAGAGCCG CTATTTCGGC GAGGGCGTCG GCATCGCGGT CCGCAGAGGC AACGACCTGC TGCGCCAGTC GTTGAACTGG GCGCTGTTTC GGGTTTGGGA AAAAGGCCGC TACACCGATC TCTGGCTGCG CTATTTCTCC GTCAGCCCGT TCTGA
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Protein sequence | MQPWIESFFN GRSAVLRALA LAIFCALLPL THDARAAETE AEAKAAAAAT AHAVPGFWDP RRRPERPDLS RLTVIRFLTE TDYPPFNFTG ADGNPAGFNV DLARALCEEI KVTCTVQMRR FETLLDALAS NRGDAIIASL AVTPQTRGKV DFTDSYYRAP GRFAARKDAV MPEIRPEYLE GKKVGAIAGS AHEAYLKAMF TDAELHSYPN DEALRAAVKR GEVDFIFGDS ISLAFWINGT DSENCCAFSG GPFTESRYFG EGVGIAVRRG NDLLRQSLNW ALFRVWEKGR YTDLWLRYFS VSPF
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