Gene RPD_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0996 
Symbol 
ID4021471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1125728 
End bp1126186 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content64% 
IMG OID637961187 
Producthypothetical protein 
Protein accessionYP_568135 
Protein GI91975476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.799439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTGC TGACGGGGTT GCTTGCGGCT GTGCTTCTTC TTGCCGGCGT GGCGTCGGTG 
CACGCCGTCG TCCGGATCGC CGATGATCGC GGCGGCCGGA TCGGAACCTA CGTCGACAAG
TATCAGGGCT TGCGCACCTC GGGCGAGACC GTGGTGATCG ACGGGCTGTG CGCCTCGGCC
TGCACCATCG TGCTTGGTGC AGTGCCACAT CACAAGATCT GCGTCACCTC GCGAGCCAAT
CTCGGCTTCC ACGCCGCCTG GGACATGGGC ACCAACGGCC GGGCGATCAC CAACCCGGAA
GCAACCCACA TGCTGTACAC GATGTATCCG GCGGAGATCC GCCGCTGGAT CGCCCGGCGC
GGCGGCTTGA CGCGGCAGAT GATCTTCCTG CGCGGCAAGC AGCTGATGTC GATGTACCGC
CCGTGCTATA TGGACGCGCA AGCGTCGGCC GAAAAATAG
 
Protein sequence
MRLLTGLLAA VLLLAGVASV HAVVRIADDR GGRIGTYVDK YQGLRTSGET VVIDGLCASA 
CTIVLGAVPH HKICVTSRAN LGFHAAWDMG TNGRAITNPE ATHMLYTMYP AEIRRWIARR
GGLTRQMIFL RGKQLMSMYR PCYMDAQASA EK