Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0982 |
Symbol | |
ID | 4021457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1110624 |
End bp | 1111478 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637961173 |
Product | protocatechuate 4,5-dioxygenase subunit beta |
Protein accession | YP_568121 |
Protein GI | 91975462 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.180998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCA TCACTGCCAG CGTCTACACC TCGCACGTCC CCGCGATCGG CGCCGCGATC GACCTGAAGA AGACCGGCGA GGACTACTGG AAGCCGGTGT TCAAGGGCTA CGAATTCTCC AAGCAGTGGC TGAAGACCGA AAAGCCGGAC GTGATCTTCC TGGTGTTCAA CGATCACGCC ACCGCCTTCA GCCTCGATCT GATCCCGACA TTTGCGATCG GCACCGCCGC CGAATACACG CCCGCCGACG AGGGTTGGGG TCCGCGCCCG GTGCCGCAAG TGATCGGCCA TCCGAAGCTC GCCGGGCATA TCGCGCAGTC GGTGATTCAG GACGATTTCG ACCTGACCAT CGTCAACAAG ATGGACGTCG ACCACGGCCT CACCGTGCCG CTCAGCCTGA TGTGCGGCGA GCCGCAGGCG TGGCCCTGCC CGGTGATCCC GTTCGCCGTC AACGTCGTGC AATATCCGGC GCCGTCGGGC CGGCGCTGCT ACATGCTGGG CCAGGCGATC GGCCGCGCGA TCCGGTCCTA TGACGAAGAT CTCAACGTGC AGATCTGGGG CACCGGCGGC ATGAGCCACC AGTTGCAGGG GCCGCGCGCA GGGCTGATCA ACCGCGAATG GGACAACGCC TTTCTCGACC AGCTGATCGC CGATCCCGAC GCGCTGTCGC GGAAGCCGCA TATCGACTAC GTCCGCGAAG CGGGCTCCGA AGGCATCGAA CTGGTGATGT GGCTGATCGC GCGCGGCGCG ATGAGCGACG TATCCGGCGG CGCCAAGCCC AAGGTCGCGC ATCGCTTCTA CCACGTCCCG GCCTCGAACA CCGCGGTCGG ACATCTCATT CTGGAGAACG CCTGA
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Protein sequence | MARITASVYT SHVPAIGAAI DLKKTGEDYW KPVFKGYEFS KQWLKTEKPD VIFLVFNDHA TAFSLDLIPT FAIGTAAEYT PADEGWGPRP VPQVIGHPKL AGHIAQSVIQ DDFDLTIVNK MDVDHGLTVP LSLMCGEPQA WPCPVIPFAV NVVQYPAPSG RRCYMLGQAI GRAIRSYDED LNVQIWGTGG MSHQLQGPRA GLINREWDNA FLDQLIADPD ALSRKPHIDY VREAGSEGIE LVMWLIARGA MSDVSGGAKP KVAHRFYHVP ASNTAVGHLI LENA
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