| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0801 |
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| Symbol | |
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| ID | 4021275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 900997 |
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| End bp | 904401 |
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| Gene Length | 3405 bp |
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| Protein Length | 1134 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637960991 |
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| Product | Sel1 |
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| Protein accession | YP_567940 |
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| Protein GI | 91975281 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.835897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.855509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCG TATCGTGGAG CGTAGAAGGT ATCGAGCCGT CGGTGCGCGA GCGGGCGGAA
GCCGCCGCCA AGCGCGCCGG CATGTCGCTG GCCGATTGGA TCAACGGTCA GCTCGGCGAT
ACCGCGCCCC AGACTTTGGT TCAGTCCCAG CCCCGCTCGG CCGCCGAGGC CGGACATCAG
CCGTTCGGCG CCGCATTGGC GGAAAACAGC GCCACCGAAG TTGCCGAGAT CCATCAGCGG
CTGGATTCTA TTGCACGCCA GATCGACCAG ATGTCGCGGC CGCCGGTGCG TAACGAGCCC
GGCGTGGCGC GGCAGCTCAA CGACGCAATT TCGCGGCTGG ACGCCCGCCT GGCGCGGATC
ACCGAGCCCA AGGCTTCTAC GACGGCTTCT ACGACGGCTT CTACGACAGC TTCTACGGCT
TCCGCGACGG TTCCTGCGGC GGCTCCCCCG GCGGCGGCAA CCGCCCGGAC CGCACCGCTT
CAACACGCCC CTCTCCAGAC CCCGACCGAG CGGGTCGAAC GCGCTGCGGC TCAGGTCTAT
CACGCCTCGC CCCCGCTCGA TCCCAATGCG CTCGATCTGG CGATCGCTGA AATCGCCGCG
CGACAGAACG AACTCGACAG CACGGTGAAC CGGGTCGCGC CGCGCCAGGC CCCCCCGATC
GTCCCGGCGA TGGCGCCGCC GCCGGTCCGA ACCGGGCCGG ACTTCTCCAG CCTGGAGCAG
CAACTCCTCA AGATCACCAG CCAGATCGAC GCGCTGCAGC GGCCCGACGT GATCGAGCAG
TCGATCGCGG CGTTCCGCGC CGATCTCGCC GAAATCCGTC AGACCATCAC CGAGGCGATG
CCCCGCAAGG CGATCGAGTC GCTCGAGAGC GAGATCAAAT CGCTGTCGCG GCGGCTCGAC
GAAACCCGCA GCAACGGCAG CGACGCCAGC GTCATCGCCG GCATCGAACG CGCGCTCGGG
GAGATCCACG ACGCGCTGCG CTCGCTCACC CCGGCCGAGC AACTCGCCGG CTTCGACGAG
GCGATCCGCA ATCTCGGCGG CAAGATCGAC ATGATCGTGC GCAACAGCGA CGATCCCGGC
ACGATGCAGC AGCTCGAGAA AGCCATCGGC GCTTTGCGTA GCATCGTCTC CAACGTCGCC
TCCAACGAGG CGCTGGCGCA GCTCAGCGAC AATGTTCACA CGCTGGCCGA CAAGGTCGAC
CAACTCACCC GCGTCGATCA TCACAGCGAC TCGTTTGCGG CGCTTGAAAA CCGCATCTCG
GCGCTGACCG CGGCGCTCGA AAGCCGCGAG CGCCCGGTCG CCGCCGACTC CTCCGAGCAG
CTCGAAGGCG CGGTGCGCGC GCTGTCGGAG CGACTCGACC AACTGCCGGT CGGCAACGAC
AGCTCGTCGG CCTTCGCGCA TCTCGAGCAG CGCGTCTCCT ATCTCCTGGA ACGGATGGAA
ACCGCCGCGA CGCCGCGCGG CAGCGGCGAT TTCGGCCGGG TCGAGGAAGG GCTGCAGGAC
ATCCTGCGGA TGCTCGAGCG GCAGCAGGAG AATTTTCATC GCTTGGCCGA CATCGAGCGC
GCGCCGCCGC CGCCCGCTTT CGATCCCGGA GTTGTGGAGA CCCTCAAGCG CGAAGTCTCC
GACATGCGCT TCAGCCAGTC GGAAACCGGC CGGCACACCC AGGACTCGCT GGAAGCGGTT
CACAACACCC TCGGCCATGT CGTCGACCGG CTGGCGATGA TCGAAGGCGA CCTGCGCGCG
GCGCGCGCCG CGCCGCAGCC CGCGCCGGAG CCGGCCAGGC CGCTGCCGGT GACCGCCCAG
CCGGCGGCGT CGCCGCCGGT TTCGCTGCCG CCGCGTCCTG AAATGCCGAA TCCCGCCGCG
GCGACTGCAT TCAGCGCTGC GCCACGAGAG TTCGCGCCGG CGCAACCGGC GCCGGCACCC
GCACCTGCAC CGCGGGCGAT CCAGGACATT CTCGATCCGG CTGCGAGCCG GGCCGCGGCC
GGCCCCTCGA CCGAGCCGCA GATTTCGTCG CCACACGCAT CGATCAATCC CGCATTGCCG
CCGGACCACC CGCTGGAGCC AGGCTCCCGC CCGCCGGCCC GGGTCACCTC GCCGTCCGAG
CGGATCGCGG CATCGGAAAG CGCGATCAAC GAACTCGGCG GCGCCAAGCC GGAGCCGGCC
AGCAGCTCGA ACTTCATCGC CGCCGCCCGC CGCGCGGCGC AAGCCGCAGC GTCGGCGACC
GGCCATTCCA CCGACAAGTC CAAAGGCGAC GGCAAAGCCG GCCCGACCCC CGGCAAGGCC
GGACCGGGCT CCACCATCGG CTCCAAGATT CGCTCACTTC TGGTTGGCGC CAGCGTCGTC
GTGATCGTGC TCGGCACCTT CAAGATGGCG ATGAACTTGC TCGACGGTGG CCAGCCGGTC
CCGGCGGCAA GCCTCAGCGA GCCAGCGCCG CAAGGGATGG CGCCGTCCGA CGAGGACGAG
GATGACACGC CACCCGCCGC CAGCGCTCCT TCCGCACCGG CGCCATCGAT GACGTCGCCG
ACCCCGATCA ATCGCCAGTC GCTGTTCGCG CCGCAACAAC CGCCCGCGGC CGCACCGGCG
CCAGCCGCTC CCGCTCCGGC TCCGGCGGTC TCCCCGGCAA CCGCACCCGC AGACATCACC
GGCACCATCC CGGCGCCGCA GGCTGGCGCC GGGATGGGCG CCGCCGGCAA GATTGCGATT
CCGGCCGGCG AAACCCTGCC CGACGCGATC GGCGGACCGG TGCTGCGCAA GGCCGCGCTG
AAAGGCGACG CCGCGGCGGC TTTCGAAATC GGCAACCGCT ACGCCGACGG CAAAGGCATC
GCGGCGAATT TCGAAGAGGC CGCCAAATGG TACGGCCGCG CTGCGCAGGC CGGCATCGTG
CCGGCGATGT TCCGGATGGG CACCCTCAAC GAGAAGGGGC TCGGGCTGAA AAAGGATCTC
GATACGGCGC GGCGCTACTA CGTGCAGGCG GCCGATCGCG GCAACGCCAA GGCGATGCAC
AATCTCGCCG TGCTCGACGC CGACGGCGGC TCGAAGGGCG CGAACTACAA GACCGCGGCG
GAGTGGTTCA GGAAAGCCGC CGAGCGCGGC GTCGCCGACA GCCAGTTCAA CCTCGGAATC
CTGTATGCAC GAGGCATCGG CGTCGAACAG AACCTCGCCG AATCGTTCAA ATGGTTCAGC
CTCGCGGCGG CGCAGGGCGA CTCCGACTCC GCCCGCAAGC GCGACGATGT CGCCAAGCGG
CTCGATCCGC AATCGCTGTC GGCGGCCAAA CTCGCGATCC AGACGTTTGT CGTCGAGCCG
CAGCCCGACG ACGCCGTCAA GGTTGCAGCG CCCGCCGGTG GCTGGGACGC CCAATCCCCG
GCGGCGGCGA TCAGTCCTGC GACCAGCAAG CGCGCGGCAC GCTAA
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| Protein sequence | MNRVSWSVEG IEPSVRERAE AAAKRAGMSL ADWINGQLGD TAPQTLVQSQ PRSAAEAGHQ
PFGAALAENS ATEVAEIHQR LDSIARQIDQ MSRPPVRNEP GVARQLNDAI SRLDARLARI
TEPKASTTAS TTASTTASTA SATVPAAAPP AAATARTAPL QHAPLQTPTE RVERAAAQVY
HASPPLDPNA LDLAIAEIAA RQNELDSTVN RVAPRQAPPI VPAMAPPPVR TGPDFSSLEQ
QLLKITSQID ALQRPDVIEQ SIAAFRADLA EIRQTITEAM PRKAIESLES EIKSLSRRLD
ETRSNGSDAS VIAGIERALG EIHDALRSLT PAEQLAGFDE AIRNLGGKID MIVRNSDDPG
TMQQLEKAIG ALRSIVSNVA SNEALAQLSD NVHTLADKVD QLTRVDHHSD SFAALENRIS
ALTAALESRE RPVAADSSEQ LEGAVRALSE RLDQLPVGND SSSAFAHLEQ RVSYLLERME
TAATPRGSGD FGRVEEGLQD ILRMLERQQE NFHRLADIER APPPPAFDPG VVETLKREVS
DMRFSQSETG RHTQDSLEAV HNTLGHVVDR LAMIEGDLRA ARAAPQPAPE PARPLPVTAQ
PAASPPVSLP PRPEMPNPAA ATAFSAAPRE FAPAQPAPAP APAPRAIQDI LDPAASRAAA
GPSTEPQISS PHASINPALP PDHPLEPGSR PPARVTSPSE RIAASESAIN ELGGAKPEPA
SSSNFIAAAR RAAQAAASAT GHSTDKSKGD GKAGPTPGKA GPGSTIGSKI RSLLVGASVV
VIVLGTFKMA MNLLDGGQPV PAASLSEPAP QGMAPSDEDE DDTPPAASAP SAPAPSMTSP
TPINRQSLFA PQQPPAAAPA PAAPAPAPAV SPATAPADIT GTIPAPQAGA GMGAAGKIAI
PAGETLPDAI GGPVLRKAAL KGDAAAAFEI GNRYADGKGI AANFEEAAKW YGRAAQAGIV
PAMFRMGTLN EKGLGLKKDL DTARRYYVQA ADRGNAKAMH NLAVLDADGG SKGANYKTAA
EWFRKAAERG VADSQFNLGI LYARGIGVEQ NLAESFKWFS LAAAQGDSDS ARKRDDVAKR
LDPQSLSAAK LAIQTFVVEP QPDDAVKVAA PAGGWDAQSP AAAISPATSK RAAR
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