Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0555 |
Symbol | |
ID | 4021023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 628269 |
End bp | 628748 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637960742 |
Product | rare lipoprotein A |
Protein accession | YP_567694 |
Protein GI | 91975035 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.789792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.255323 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGACA CGAAGAAGTC TCCGCCGGGA TTAGTAACCC GGCCGCGTAC GGCTTTCGCG CTGATCGCCG CAACTGTTCT GATGAGCGGA GCAGCTGCAA CCGAGGCTTC GGCCCGTTCG AAGCGTCATC ATCATCACGC CCATCACAAC AACGCCCAGA ACGACTGGCG TGACGCCAAC GCAGCGCTGG GGTCGGGTGG CCGTAGCTTC TCCGGCGTGG CCTCGTATTA CGGCAATGAA TCTGGCAACC GCACTGCCTC GGGCCAGCGC ATGAACGCCA ACGCGATGAC CGCTGCGCAT CGCAGCCTTC CGTTCGGCAC CAAGCTGCGC GTCACCCATG GCGGCCGCAG TGTCGTCGTC ACCGTCAACG ATCGCGGCCC ATTCATTCGC GGCCGTGTGC TCGATCTGTC GACCGGCGCC GCGCGCGCGA TCGGTCTGAC CAGCCGCGGA GTCGGCCGGG TCGTCGCGGA AGTCATGTAA
|
Protein sequence | MTDTKKSPPG LVTRPRTAFA LIAATVLMSG AAATEASARS KRHHHHAHHN NAQNDWRDAN AALGSGGRSF SGVASYYGNE SGNRTASGQR MNANAMTAAH RSLPFGTKLR VTHGGRSVVV TVNDRGPFIR GRVLDLSTGA ARAIGLTSRG VGRVVAEVM
|
| |