| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0553 |
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| Symbol | xerC |
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| ID | 4021021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 624737 |
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| End bp | 625726 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637960740 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_567692 |
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| Protein GI | 91975033 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.172687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.167276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCGG ACTCCTTTAT GGCCAAAGCC CAACCCGCCC CCGCGCCGAT CGAGCTCGCC
TGCGCCAGCG CCGATCTCAA CGCCGAGTTC ACCCGCTGGC TGTCGCATCT GCGCGCCGAG
CGACGGCTCT CCGGCAAGAC GCTGGAGGCC TATGCGCGGG ATTTGCGCCA GTTCCTGATC
TTCCTCGCCG GCCATTGGGG TGGCGTGGTC ACGCTCGGTC GATTCGCACG GCTGGAGGCC
ACCGATGTCC GCGCCTTCAT GGCGGCGCGG CGCGGCGATG CGATCGCCGG CCGTTCGCTG
ATGCGGGCGC TGGCCGGACT GCGCTCGTTC GGCCGCTTCC TTGAACGCGA AGGCAAGGGC
AGCGTCGGCG CGCTGTCGTC GGTGCGGGCG CCCAAGATAA AGAAAAGCCT GCCCAAACCG
ATCCAGATCG CCGCCGCCAA ACGGCTCGCC GACGCCGACG AGCGCGCCGG CGAGGACCGC
GAGACCTGGA TCCTCGTCCG CGACGCCGCG GTGATGGCGC TGTTATACGG CTCAGGCCTG
CGCATTTCCG AAGCGCTTGG GCTGCGCCGC CGCGATGTGC CGGCGCCGGG CAAAGGCGAC
ACGCTGATCG TGCTCGGCAA GGGCAACAAG ACCCGGATGG TGCCGGTGCT GCAAAACGTG
CTGGCGCAGA TCGCCGATTA CGCGAGCGCC TGCCCGCATC CGCTGCCGCC GGACGGGCCG
ATGTTCGTCG GCGCCCGAGG CGGACCGCTC AGCCCGCGAA TCATCCAGCT CGCGATGGAG
CGGCTGCGCG GCTCGCTGGG ATTGCCCGAC TCGGCCACGC CCCATGCGCT GCGGCACTCC
TTCGCGACGC ATCTTTTGAC CCGCGGCGGC GATCTGCGGG CGATCCAGGA GCTGCTCGGC
CACGCCTCGC TGTCGACCAC GCAGGTTTAC ACCGGCATCG ATACCGAACG GCTGCTGGAA
GTCTACAACA GCGCCCACCC GCGGGCATGA
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| Protein sequence | MRPDSFMAKA QPAPAPIELA CASADLNAEF TRWLSHLRAE RRLSGKTLEA YARDLRQFLI
FLAGHWGGVV TLGRFARLEA TDVRAFMAAR RGDAIAGRSL MRALAGLRSF GRFLEREGKG
SVGALSSVRA PKIKKSLPKP IQIAAAKRLA DADERAGEDR ETWILVRDAA VMALLYGSGL
RISEALGLRR RDVPAPGKGD TLIVLGKGNK TRMVPVLQNV LAQIADYASA CPHPLPPDGP
MFVGARGGPL SPRIIQLAME RLRGSLGLPD SATPHALRHS FATHLLTRGG DLRAIQELLG
HASLSTTQVY TGIDTERLLE VYNSAHPRA
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