Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0486 |
Symbol | |
ID | 4020954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 561057 |
End bp | 561701 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637960673 |
Product | hypothetical protein |
Protein accession | YP_567625 |
Protein GI | 91974966 |
COG category | [C] Energy production and conversion |
COG ID | [COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.899419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCA TGACAGTCAG CGAACAGGCC AACGCCGGAC AAGCCGGCGA GGAGACTGTG CGCAAAGTGA TCCAGCCGGC CTGGGTGCGG ATCATGCACT GGATCAACGC GGTCGCGATG ATCGTGATGA TCATGTCCGG CTGGCAGATC TACAACGCCT CGCCGTTGTT CGACTTCCAG TTTTCGCGCA GCGTCACGCT GGGCGGCTGG CTCGGCGGCG GGCTGTTGTG GCACTTCGCG GCGATGTGGG TGCTGATGAT CAACGGCCTG TTGTATCTTG TCGTCGGTCT CGCCACCGGT CGGTTTCGCC GCAAGCTGTT GCCGATCACG CCGTCGGGCG TCGCCTCCGA TCTCGCCAAG GCCGCGACCT TCCGGCTGTC GCACCGCGAT CTCACCACCT ACAACTACGT CCAGAAGCTG CTCTATGCCG GCATCATGGG GGTCGGCATC GTCGTCGTGC TCTCCGGGCT GTCGATCTGG AAGCCGGTGC AGTTCCAGCT GCTCACGGCG GTGTTCGGCG GCTACGACAC CGCGCGCTAC GTGCATTTCT TCGCGATGGC TTCGATCGTG GCGTTTTTGA TCGTCCATAT CGCGCTGGCG GTACTGGTGC CGAAGAGTCT TCGCGCGATG ATCATCGGGA GATAA
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Protein sequence | MSSMTVSEQA NAGQAGEETV RKVIQPAWVR IMHWINAVAM IVMIMSGWQI YNASPLFDFQ FSRSVTLGGW LGGGLLWHFA AMWVLMINGL LYLVVGLATG RFRRKLLPIT PSGVASDLAK AATFRLSHRD LTTYNYVQKL LYAGIMGVGI VVVLSGLSIW KPVQFQLLTA VFGGYDTARY VHFFAMASIV AFLIVHIALA VLVPKSLRAM IIGR
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