| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0448 |
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| Symbol | |
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| ID | 4020914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 516232 |
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| End bp | 517674 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637960633 |
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| Product | ammonium transporter |
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| Protein accession | YP_567587 |
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| Protein GI | 91974928 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.595017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.335861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTCA AACGTCCCTA CGGCGCGGGA TTGGCCGTGC TCGCAGCCGG CCTGTTCGCC
GCGACTGCCG CCTACGCCGA GCCCACCGTC AACAAGGGCG ACAACGCCTG GATGATGACC
TCGACGATTC TCGTCCTGCT GATGACCATC CCGGGCCTCG CGCTGTTCTA CGGCGGTCTG
GTTCGCTCCA AGAACATGCT CTCGGTGCTG GCGCAGGTGT TCTACACCGT CTGCGTCGGC
AGCATCATCT GGGCGGTGTA CGGCTACAGC CTCGCCTTCA CCGGCGGCTC GGATTTCATC
GGCGGCTTCT CCAAGGCGTT CCTCGCCGGC ATCACCCCCG ATTCGAAGGC CGCCACGTTC
TCGGTCGACG CCAACATCTC GGAGCTGATC TACGTCTGCT TCCAGATGAC GTTCTGCACA
CTCACCCCGG CGCTGATCGT CGGCGCCTTC GCCGAGCGCA CCCGCTTCGC CGCGGTGGCG
CTGTTCATCC CGCTGTGGAT CACCCTGATC TACCTGCCGA TGGCGCATAT GGTCTGGTAC
TGGGCCGGTC CGGACGCGAT CAGTGACGCC GTCAAGGCGC TCGCCGCTGC GACCGACGAA
GCCACCAAGG CTGCGGCGCA GGCCAAGCTC GACGAGGTCA ACGCCGACGC CGGCTTCCTG
TTCAAGAAGG GCGCGCTCGA CTTCGCAGGC GGCACCGTGG TGCACATCAA CGCCGGCATC
GCCGGCCTGG TCGGCGCCCT GCTGGTCGGC CGTCGCACCG GCTACGGCAA GGAGCTGATG
GCTCCGCACT CGCTGACCAT GACCATGATC GGCGCCTCGC TGCTGTGGGT CGGCTGGTTC
GGCTTCAACG CCGGTTCGGC GCTCGAAGCT TCCGGCGGCG CCGGGCTCGC GATGGCCAAC
ACCTTCGTCG CCACCGCGGC GGCGGCGCTG TCGTGGATGT TCGCGGAGTG GATCTTCAAG
GGCCACCCCT CGCTGCTCGG CGCGCTGTCC GGTGCGGTGG CGGGCCTGGT CGCGGTCACC
CCCGCGGCGG GCTACTCCGG CCCGATGGGC GCGATCGTGC TCGGCCTGGT CGCCGGCGTG
GTCTGCCTGT TCTTCTGCAC CGTGATCAAG AACGCGCTGA AATATGACGA CTCGCTCGAC
GTGTTCGGCG TCCACGCCGT CGGCGGCATC GTCGGCGCGC TCGGCACCGG CATCGTGGTG
AACCCGGCGC TCGGCGGCAC CGGCGTGTAC GACTACACGC TGGGCAAGGT CGCCGAATAT
GACCTCGTCA ACCAGATGAT CTCGCAGAGC TGGGGGGTCG GCACCACGCT GCTGCTGTCC
GGCATCGGCT CGGCGATCCT CTACAAGGTC GTCGACGTCA TCGTCGGCCT GCGCGCCCCG
GTCGAAGTCG AGCGCGAAGG CCTCGATCTC GTCGAGCACA CCGAGCGCGC CTACAACATG
TGA
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| Protein sequence | MTFKRPYGAG LAVLAAGLFA ATAAYAEPTV NKGDNAWMMT STILVLLMTI PGLALFYGGL
VRSKNMLSVL AQVFYTVCVG SIIWAVYGYS LAFTGGSDFI GGFSKAFLAG ITPDSKAATF
SVDANISELI YVCFQMTFCT LTPALIVGAF AERTRFAAVA LFIPLWITLI YLPMAHMVWY
WAGPDAISDA VKALAAATDE ATKAAAQAKL DEVNADAGFL FKKGALDFAG GTVVHINAGI
AGLVGALLVG RRTGYGKELM APHSLTMTMI GASLLWVGWF GFNAGSALEA SGGAGLAMAN
TFVATAAAAL SWMFAEWIFK GHPSLLGALS GAVAGLVAVT PAAGYSGPMG AIVLGLVAGV
VCLFFCTVIK NALKYDDSLD VFGVHAVGGI VGALGTGIVV NPALGGTGVY DYTLGKVAEY
DLVNQMISQS WGVGTTLLLS GIGSAILYKV VDVIVGLRAP VEVEREGLDL VEHTERAYNM
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