| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0398 |
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| Symbol | |
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| ID | 4020864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 464836 |
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| End bp | 466035 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637960583 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_567537 |
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| Protein GI | 91974878 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGAC TGCGCGAGCC AAACACGAAG TCGTTGCGAA CGACACGCCG AACGGCGATC
GGCCTGATCC TCGGCACGCC GTTGCTCGGC GCCTGCTCGG GTGTGCAGCA GACCCTCAAC
AACCAGTTCG GCCAGCAGCC GCCGCCGGAT GCGGCGCAGC AGCAGTCGCA ATCGGTCGGC
ACCGGTCGGG TCAAGGTCGG CCTGGTGCTG CCGCTGTCGG CGGCGGGCAA TGCCGGCGTC
GCCGCGCAAT CGATGAAGAA CGCCGCCGAG ATGGCGCTTG CCGAATTCAA CAATCCCGAC
GTCCAGTTGC TGGTGAAGGA CGACGCCGGC AATCCGCAGG GCGCGCAATC CGCGACCCAG
CAGGCGCTCG ACGAAGGCGC CGAGATCATT CTCGGCCCGC TGTTCGCGCA ATCGGTGCCC
GCCGCAGCCC AGCTGACCCG CGCCCGCGGC ATCTCGATGA TCGCGTTTTC GACCGATTCG
AGCGTCGCCG GCCGCGGCGT GTATCTGCTG AGCTTCCTGC CGGAGTCGGA CGTCAATCGG
ATCATCGGCT ATGCGGCGAG CGTCGGCAAA CGCTCCTATG CGGCGCTGCT GCCCGACAAC
GCCTATGGCG GCGTGGTCGA AGCCGCCTTC AAACAGGTGG TCGGCACCAA GGGCGGCCGG
ATCGCCGCGT TCGAGAAATA CGGCGCCGAT CGCGCGGCTG CGGCGCGGAC GATCGCGCAG
GCGCTTGCGG GCGCCGATTC GCTGCTGCTG GCCGATGACG GCGATGCGTT GGCCGGGGTC
AGCGACGCCC TGACAGCGGC GGGGGTCGAT CTGCGCCGCC TGCAACTGCT CGGCACCGGA
TTGTGGGACA ATCCGCGGGT CTTCGCGACG CCGGCGCTAC AGGGCGGGCT CTATGCCGCG
CCGGATCCGT CCGGCTTCCG CAGTTTCTCC GGCCGCTATC GCGCCCGCTT CGGCCAGGAC
CCGGTCCGCA CCGCGACGCT CGCTTACGAC GCGGTGGCGC TGGTCGCCGC GCTGGCGCGC
ACGCAAGCGA CGCGACGGTT TTCCTCCGAC GTGCTGACCA ACCCGTCGGG CTTCGCCGGT
ATCGACGGCC TGTTCCGCTT CCGCGCCGAC GGCAGCAATG AACGCGGCCT CGCCGTGATG
CGCGTCGCCA CCGGCGGCGC GCAGGCGGTG GCCGGCTCAC CGAAGAGCTT CGGGGCTTAA
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| Protein sequence | MAGLREPNTK SLRTTRRTAI GLILGTPLLG ACSGVQQTLN NQFGQQPPPD AAQQQSQSVG
TGRVKVGLVL PLSAAGNAGV AAQSMKNAAE MALAEFNNPD VQLLVKDDAG NPQGAQSATQ
QALDEGAEII LGPLFAQSVP AAAQLTRARG ISMIAFSTDS SVAGRGVYLL SFLPESDVNR
IIGYAASVGK RSYAALLPDN AYGGVVEAAF KQVVGTKGGR IAAFEKYGAD RAAAARTIAQ
ALAGADSLLL ADDGDALAGV SDALTAAGVD LRRLQLLGTG LWDNPRVFAT PALQGGLYAA
PDPSGFRSFS GRYRARFGQD PVRTATLAYD AVALVAALAR TQATRRFSSD VLTNPSGFAG
IDGLFRFRAD GSNERGLAVM RVATGGAQAV AGSPKSFGA
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