Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0260 |
Symbol | |
ID | 4020718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 299022 |
End bp | 300143 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637960439 |
Product | perplasmic binding protein of ABC transporter |
Protein accession | YP_567401 |
Protein GI | 91974742 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.519956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCG CCTTCCTGCT GCGAGCGTTA ACCGGGGCCG TCGCCGTAGC TTTGCTGGCC GTGCCGGTCC ACGCTTCGCC GCCGCCGGCT CCGGAAAAGC CGGTGGAAAA GCCTGCCCCG CCGCCGCCGC CGAAGAAGCC CCCTCCGCCG GTGGTGCAGC CGGTCCGCAA AGTGCCGGAA GGCGGCTTCG ATAAGGTGTC GTTCGGCACC AATTGGGTCG CCGAGGGCGA GCATGGCGGG TTCTTCCAGG CGGTCGCCGA CGACACCTAC AAGAGCTACG GCCTCAACGT GACGATCGTG CCGGGCGGAC CCAACGTCAA CAATCGCGCC TTGCTGCTCG CCGGCAAGCT CGACTTCTTC ATGACCGCGA ACACGCTGCA ATCGTTCGAC GCCGTCGCCA ACAACGTACC GGTGGTGGCG ATCGCCGCGG TGTTCCAGAA GGATCCGCAG GTGTTCCTGA CGCATCCGGA ATCCAAGGTC GGACAGCTCG ACGACTTGAA ACGTCTGACG CTGTTCGTCT CCAAGGAAGG CATCGCCAGC TACTTCCAGT GGCTGAAATC CGAATACGGC TTCAACGAAG CCAAAGTGAA GCCCTACACC TCGAACCCGC AGCCCTTCAT CGTCGATCGC AACGCCGCGA TGCAGGGCTA TGTCACTTCC GAGCCGTTCG TGATCGAGCA GAAAGCGAAG TTCAAGCCGA GCGTGCTGCT GCTCGCCGAT TACGGCCTCG ACGGTTACTC GACGCTGATC GAGACCCGGC GCGACCTGAT CGACAAGAAC CCCGACATGA TCCAGCGCTT CGTCGACGCC TCGATGATCG GCTGGTACAA TTATCTGTAC GGCGACAACG CCGCCGGCAA CGCGCTGATC AAGTCGCTCA ATCCGGAGAT GACCGACGAG ATGCTGGCCT ATTCGGTCGC CAAGATGAAG GAGTACGGCA TTGTCGATTC CGGCGACACG CTGCGCAACG GCATCGGCGC GATGAGCGAC GAGCGCTACG CCAGCTTCTT CGACAAGATG TCGCGCGCCG GCGTGGTGAA GCGCGATCTC GATTTCCGCC AGGCCTATAC GCTGCAATTC ACCAACAAGG GCGTCGGCGT CGATCTGCGC CCGAGCAGGT AG
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Protein sequence | MTPAFLLRAL TGAVAVALLA VPVHASPPPA PEKPVEKPAP PPPPKKPPPP VVQPVRKVPE GGFDKVSFGT NWVAEGEHGG FFQAVADDTY KSYGLNVTIV PGGPNVNNRA LLLAGKLDFF MTANTLQSFD AVANNVPVVA IAAVFQKDPQ VFLTHPESKV GQLDDLKRLT LFVSKEGIAS YFQWLKSEYG FNEAKVKPYT SNPQPFIVDR NAAMQGYVTS EPFVIEQKAK FKPSVLLLAD YGLDGYSTLI ETRRDLIDKN PDMIQRFVDA SMIGWYNYLY GDNAAGNALI KSLNPEMTDE MLAYSVAKMK EYGIVDSGDT LRNGIGAMSD ERYASFFDKM SRAGVVKRDL DFRQAYTLQF TNKGVGVDLR PSR
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