Gene RPD_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0218 
Symbol 
ID4020676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp250275 
End bp250799 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID637960397 
Producthypothetical protein 
Protein accessionYP_567359 
Protein GI91974700 
COG category[S] Function unknown 
COG ID[COG3807] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.236167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0484329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGA AGAGACCGAT CGCAGCAGTG TTGTTCGCTG GTGCAATAAC AGGCGCTGCG 
GCGCCTGCGC TTGCTGCGAA AGACTCGCCG CTGTCGGCCA GCGGCTTGCC GGTGCCGCGC
TACGTCAGTC TTAAGTCGGA TCACGTCAAC GTCCGGATCG GCCCGACCAA GGACAACGAC
GTCGCCTGGG TCTACACCCG CGCCGGGCTG CCGGTGGAGA TCACCGCCGA GTTCGAGAAC
TGGCGGCGGG TGCGCGATTC GGAAGGGGCC GAGGGCTGGG TGTATCACTC GCTGCTGTCC
GGCCGCCGCA CCGCGGTGAT CACCATGAAG GACAAGGACG AACTGGCAAC GCTGTACGAA
GCCGCCTCGA CCGGCAGCGC GGTCGCGGCG CGGCTGCAGG CCGGCGTGGT GGCGCAGATC
AAACGCTGCG ATCCGAACTG GTGCCGGATC ATCGGCTCCG GCTTCGACGG CTGGATCGAA
AAGCAGCGGC TGTGGGGCGT GTACGCCGAC GAACAGGTGA AGTGA
 
Protein sequence
MKLKRPIAAV LFAGAITGAA APALAAKDSP LSASGLPVPR YVSLKSDHVN VRIGPTKDND 
VAWVYTRAGL PVEITAEFEN WRRVRDSEGA EGWVYHSLLS GRRTAVITMK DKDELATLYE
AASTGSAVAA RLQAGVVAQI KRCDPNWCRI IGSGFDGWIE KQRLWGVYAD EQVK