Gene RPD_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0163 
Symbol 
ID4020619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp188553 
End bp189137 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content67% 
IMG OID637960340 
Producthypothetical protein 
Protein accessionYP_567304 
Protein GI91974645 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.103977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAG CCCTCTCATC GCCGCACGAC GCGCTCCCTC GCCCGCTTGC GGGAGAGGGT 
TGGGGTGAGG GCGACACGGG CACGGAGCTT GCGATGGACG ATCCGAAGCA ACCGAGCTGG
AATGTATCTC CGAGCCTGCG CCGCCACGCG CGCGAGTTGC GCAAGACATC GACCGACGCC
GAGCGGCTGA TGTGGTCGGC GCTGCGCGAC AAGCAGCTCA ACGGTTTCTC GTTTCGCCGT
CAGGTGCCGA TCGGGCCGTT CATCGCGGAC TTCGCCTGCC ATTCGGTCAA GCTCGTCGTC
GAGATCGACG GCGGCCAGCA TTTTTCCGAC GACGCCGAGC GCGCCGACGC GTCTCGCACG
GCGCTGATCG AGGCGCGCGG ATTTCGGATT GTCCGGTTCA GCAATGCCGA GGTGATGAGT
AATCGCGACG GCGTGCTGCA GAGCATTGCC GCTGAGCTTG CGGCAAGTGC CCCCACCCCG
ACCCTCCCCC GCAAGCGGGA GAGGGAGCGC GCCAAGCGCG CGGCCAAGCA GCGCCCTGAA
CAGATCGATT CCAAGCAGCG CCCTGCGGCG GGCGATGCGG ACTAA
 
Protein sequence
MMKALSSPHD ALPRPLAGEG WGEGDTGTEL AMDDPKQPSW NVSPSLRRHA RELRKTSTDA 
ERLMWSALRD KQLNGFSFRR QVPIGPFIAD FACHSVKLVV EIDGGQHFSD DAERADASRT
ALIEARGFRI VRFSNAEVMS NRDGVLQSIA AELAASAPTP TLPRKRERER AKRAAKQRPE
QIDSKQRPAA GDAD