Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0107 |
Symbol | |
ID | 4020563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 121938 |
End bp | 122756 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637960284 |
Product | phosphoribosyltransferase |
Protein accession | YP_567248 |
Protein GI | 91974589 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCGG AGGCGATCAC GGCTTCGGGT GCGAAAGCGG ACGGCGGCGT CCTTTTCAAG GCGTTCGGCG CTGTGCGCCG GGTCTGGACG CGCGCGGCGC ATCTCGCGCT CGACGTCGCG CTGCCGACGC TGTGCGTCGC CTGCCGCGAA CCGGTGGCCG GCGACGGCCT GTGCGCGCCA TGCTGGTCGC AATTGTCGTT CATCGCGCCG CCTTATTGCG AGAAGCTTGG CATCCCCTTC GTTTATGATC CTGGCCCCGG TCTCCTGTCG ATGCAGGCGA TCGCCGATCC GCCGGCCTAT GCCCGCGCCC GCGCGGCGGT GCGTTACGAC GAGGTGGCGA AGACGCTGGT GCACGCGCTG AAATTCCACG ACCGCGTCGA TCTCGCGCCG ACCATGGGGC GCTGGATGGC CCATGCCGGC CAGCCGCTGC TCGCAGATGC CGATCTGTTG ATCCCGGTGC CGCTGCATTG GCGGCGCGGG TTTTCCCGGC GCTACAACCA GTCCGGCGCG CTGGCCCGCG CGATCGGCCG GCAGGCCGGG CTGCCATTGG CGATCGAGGC GCTGAAGCGA ATCCGGCCGA CCGCGCACCA GATCGGGCTG TCGCGGGCGG AGCGAGCCGC CAATGTGCAG GGCGCATTCA AGGTTCCGCC GGAGTGCAAG GCCGAGGTGC AGGGCCGGCG GATCGTGCTG GTCGATGACG TGCTGACCTC CGGCGCCACC GTCGACGCCT GCGCCCGCGC GCTACTCCGG GCCAAGGCCC GATCGGTCGA TGTGCTGGTC TTCGCCCGGG TTGTGGATAC GCTGAAATCT CCCATATAA
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Protein sequence | MQAEAITASG AKADGGVLFK AFGAVRRVWT RAAHLALDVA LPTLCVACRE PVAGDGLCAP CWSQLSFIAP PYCEKLGIPF VYDPGPGLLS MQAIADPPAY ARARAAVRYD EVAKTLVHAL KFHDRVDLAP TMGRWMAHAG QPLLADADLL IPVPLHWRRG FSRRYNQSGA LARAIGRQAG LPLAIEALKR IRPTAHQIGL SRAERAANVQ GAFKVPPECK AEVQGRRIVL VDDVLTSGAT VDACARALLR AKARSVDVLV FARVVDTLKS PI
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