| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0018 |
|---|
| Symbol | |
|---|
| ID | 4020472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 23793 |
|---|
| End bp | 24572 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637960194 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_567159 |
|---|
| Protein GI | 91974500 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1409] Predicted phosphohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.275783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTGT GGATCCTGAG CGACCTTCAT CTCGAGCTGA CCCGCGGCTG GGACCTGCCG
GCCGGCGACG CGCGTCCCGC GTTCGACATG CTGGTCGTCG CCGGCGACTT GATCCCGCGC
ATGGAGCGCG GCGTGCGGTG GCTCGCGGAG CGCGTGACCG ATCGTCCGGT GATCTACATC
GCCGGCAATC ATGAGTTCTA CGGCACGGAT ATCGACCGCA CCGTCGAGAA GGCGCGCGAC
GCCGCGGCCG GCACCAACAT CCACGTGCTG CAGAATGAAT CCCTGACGAT CGACGGCGTC
ACCTTCCTGG GAGCGACGCT CTGGACCGAC TTCGACCTGT TCGACAATCA GGATTATGCG
ATGGCGGCGG CGGGCGAGGT CATGAACGAC TATCGCAAAA TCCGGATCGA CGACTACCAG
CGCCGGCTGC GGCCCGCCCA CACGCTGCAG CGGCATTGGG AGTCCCGCGA CTTTCTCGCG
CATGGACTGC GCGGCGGCGG CCGCAATGTG GTCGTCACGC ACCACGGCGC GCATCCGGAG
GCTGCACGCC GTGGGTATGA GCGCGACATC ACCTCCGCTG CGTACACCAG CGACCTCGAG
GCGCTGATCC TGGAGGGCGC GCCCGAGCTC TGGATCTACG GCCACACCCA TGAGAGCCGC
GATTTCAGGG TTGGAGCGAC CCGGATGATC AGCAACGCCA AAGGCTACGG GCCCTGGCTG
CCGAGCGATC CGACCTGGGA CAACGCGCAA TTCGCCCCGA ACTTCGTCAT CGAAATCTGA
|
|---|
| Protein sequence | MRLWILSDLH LELTRGWDLP AGDARPAFDM LVVAGDLIPR MERGVRWLAE RVTDRPVIYI
AGNHEFYGTD IDRTVEKARD AAAGTNIHVL QNESLTIDGV TFLGATLWTD FDLFDNQDYA
MAAAGEVMND YRKIRIDDYQ RRLRPAHTLQ RHWESRDFLA HGLRGGGRNV VVTHHGAHPE
AARRGYERDI TSAAYTSDLE ALILEGAPEL WIYGHTHESR DFRVGATRMI SNAKGYGPWL
PSDPTWDNAQ FAPNFVIEI
|
|---|
| |