| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0015 |
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| Symbol | |
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| ID | 4020469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 19336 |
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| End bp | 22488 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637960191 |
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| Product | hypothetical protein |
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| Protein accession | YP_567156 |
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| Protein GI | 91974497 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1483] Predicted ATPase (AAA+ superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.195292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAGA CAATCAAGGA TGCCTGCCAA TTCGATCCAA AGGCGATCGA CTATGCGCTG
AGCGACCAGA TCGAGAATCT CGACGACCTG GTCGGTCACG ACCCCGTCGC CGCCGAGGCA
TTTTTCAGGA AGACCTACGT CACCGGCGGT ATGAAAACGT TGCTCCGCCA AGGTCTGCAG
CGCCTCGCGG GCAGTTCCGG ACAGGCGGTC TTCGAACTTA AGCAAGCGAT GGGCGGCGGC
AAAACCCACT CGATGTTGGC GTTGGGCTAT CTGGCGGCCA ATCCCAAGTT GTTCGAACTC
GTCGCCAAGG ACATCACGCA AGGCATCAAG GCCGAGCCGG CGCAGGTCGT CGCGATTTCC
GGCCGCTCGA TCTCTCGCGA CCAGCATCTA TGGGGTGACA TCGCCGACCA ACTCGGCAAG
GCGGACAAGT TTCTCGAGTT CTACAAGGGC ATGCCGCAGG CCCCTAACGA AAAGGACTGG
ATCGGTTTGA TCGGTGACGC GCCGACGCTG ATCTTGCTCG ACGAGCTTCC GCCCTATTTC
AAGAATGCCA TCACTCAGAA CGTGGGCGGC GGCACCCTGG CCGACGTCAC CACCTATGCC
GTCTCGAACT TGCTGTCGGC GGCACTGAAG TTGCCGCGGC TGTGCATCGT GATCTCGAAC
TTGTCCGGCG CCTATGAGGG CGCCACTAAG AGCATCACCA CGATGGTCGC GAAGGCCACC
CGGGATCTCC AGAACGAAAC CGGTCGGCAG GCCAAGGGCA TCACGCCGGT CGAGCTCGGC
TCCGACGAGA TCTACAACAT CCTGCGCACC CGTCTCCTCA CCAAGGACCC CGACCAGAAG
GTCATCAACG CCGTCTCCAC GGCGTTTTCC GACTCGATCT CCGACGCCGT CAAATCCAAG
ACGATCGCGA AGTCGGCCAC CCAGATCGCC GACGAGATCG CCGCCAGCTA TCCTTTCCAT
CCCTCCTTCA AGCACATCCT GGCACTGTTC AAGGAAAATG AGCGTTTCCG TCAGACGCGC
GGCCTGATGA CGATGGCGGC CCTGATGGTG AAGTCGGCGC TCGGTCGACC GACCAACGAC
GTCTATCTGG TCGGCTGCCA ACACATCGAT TTGGCCCAGC CGGACGTGCG TGACGTCATC
ACCAACGTCT ACGATCTCTC CGGAGCGATC ACCCACGACA TCGCCGGCAC CGCCACCGAG
CGTGCGCACG CCCAGACCAT CGACGACGTG GCCGATACCG ATGCCGCCAG CCAGGTGGCC
AGGCTTGTCC TGATGTCCTC GTTGTCCGAG GCCAACGACG CCGTGAAGGG CCTCACCAAG
TCGCAGGTCG TCGAGAACCT CGTCGCCCCG CAGCGCTCGC CACATGAATT CGATGAGGCA
TTCGAAAAGC TCCGGATCGA GTGCTGGTAT CTGCACCGCA AGGAGAACGA CGCCTGGTAC
TTCTCGAAGA ACGAGAACCT CAAGAAGAAG ATCGAAAAAT ACGCCTCGAC CGCCGCGCAA
CCGAAGATCG ACGCTGAGAT GGAGCGTCGA CTGCAGATGG TCTTCGAGCC GAAGCGCCGC
AATGCCTATT CGTCGGTGCA GGCCCTGCCG AAGATCGAGG ACATCAAGCC GTCCGGGGAC
CGCGTGCTGC TGGTGTTGAG CCCCGACAAA CGCGTTCCTC CCGAGGATGC GCAGCGGCTA
TTCGATGCGA TCGTCGAGAA GAACAACTTC TGCGTGGTGA CCGGCGACGG CACCGACCTG
GCGAAGCTCG AGGACAAGGT CCGTCGGATC TGGGCGACGG CCAAGGTTCT CCAAGAGGAC
GGCGGCGATC GCTCGCCGAA CCTGGCCGAG CTTCAGGAGG AGACCGAGAC CGCCGAGTTC
GAATTCAACT CGACCCTGAT CGCCCTGTTC AATCGCGTGT ACTATCCGTC CAGACTTCCG
AAGCCGCTGC CCAACGGTGC GAATGAGGGC CTGACCTATG CGGCCCTGAA GCTCGTGGAA
CGTCGCACCA GGGAGAACGG CCCCACCACG ATCGACGGAG AAGCGGCCGT CGAGGAAGCG
TTGAGCGCCA CCGGCGCCTC GAAGCTCATT CTGACGCCCG CGGACGAAGG TAACGCGGCC
AGCCTGCGAA ATCGCGCCCA GGATGTGTTG TGGGGCACGA CGGAGCGAAA GACTCGCTGG
AAGGACGTCG AGGAGCGCGC GATCAGCAAC GTCCGCTGGC CGTGGCTTCC GCCCAAAAGC
CTCGATGAGA TCAAGCGCAC CGCCGTCAGC ATCGGCGAAT GGCGCGACTC CGGCGACGGC
TACATCGAGA AGGGACCTTT CCCTCAGGCG AAGACCTCCG TGAAGGTCGT CACCCGCGCC
TACAACGATG ATACCGGCAT GGCGACGATC GAGCCGACGC CGGTCGACGC CGGACCGAAC
GCCCGCGTCC ACTTTGCGCC AACCAAGGAC GTGTCGGGGT CGTCGCCGGT CGTTCCGGAC
ACTATCTTCG ACCGGGATGA CACCGTGCTC TGGTTCTTGG CGGTCGATCC GGACGGCAAG
CACGAAACCG GCGACCCGGT GAAGTGGAGC AACACTCTTA CGCTCACCCA TCAACCGAAG
GAGGTCATGG GCAAGCGTAC CGTCGAGTTG ACGGTGAAGC CGCGTGGAAC GATCCGATGG
AACATCGACG GTACGAACGC GCGAGAGGGC AAGGCTTATT CGGGTCCGAT CGCCCTGAAC
GGTGACGACG AAGTGAAGAT CTACGCCTAC GCCGAGGACG CCGGCGTAGA GGTGACCAAG
GTTTTCCCAA TCCGAGCCGC AGCGGAAGAC GAGTTCAAGA TCGACCCGGA ATTGCCCGTC
GCTATCAAGA AGCGTCAGAA GATCGTCTCC ACCAAGGACG TGTTTGCGAC GCTCAAAGCT
CTCAAGGAAG CGCGCGGCCT CCTCAAGGGA AGCCTTTCCG CCACGGTTGG TCAGGGCGAC
GTGAACGCGA CCACTCGGTT CGGACCGCAG ACCAATCTGA ATTCGGCCGC GATCGAGACC
TTCCTTGGCG CTGCGCGCCT CTCGATCGCC CAGGAGGCGG CTGAGGTCGA AATCGGTTTC
TCGGAAGTTC ACTTCGAGAC CGGCCGCGAG ATGGAAGAGT TCGTCAAAGC AGTTGGCTGG
ATCGTTTCAC CAAACGAGGT TGAACAGCAG TGA
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| Protein sequence | MLQTIKDACQ FDPKAIDYAL SDQIENLDDL VGHDPVAAEA FFRKTYVTGG MKTLLRQGLQ
RLAGSSGQAV FELKQAMGGG KTHSMLALGY LAANPKLFEL VAKDITQGIK AEPAQVVAIS
GRSISRDQHL WGDIADQLGK ADKFLEFYKG MPQAPNEKDW IGLIGDAPTL ILLDELPPYF
KNAITQNVGG GTLADVTTYA VSNLLSAALK LPRLCIVISN LSGAYEGATK SITTMVAKAT
RDLQNETGRQ AKGITPVELG SDEIYNILRT RLLTKDPDQK VINAVSTAFS DSISDAVKSK
TIAKSATQIA DEIAASYPFH PSFKHILALF KENERFRQTR GLMTMAALMV KSALGRPTND
VYLVGCQHID LAQPDVRDVI TNVYDLSGAI THDIAGTATE RAHAQTIDDV ADTDAASQVA
RLVLMSSLSE ANDAVKGLTK SQVVENLVAP QRSPHEFDEA FEKLRIECWY LHRKENDAWY
FSKNENLKKK IEKYASTAAQ PKIDAEMERR LQMVFEPKRR NAYSSVQALP KIEDIKPSGD
RVLLVLSPDK RVPPEDAQRL FDAIVEKNNF CVVTGDGTDL AKLEDKVRRI WATAKVLQED
GGDRSPNLAE LQEETETAEF EFNSTLIALF NRVYYPSRLP KPLPNGANEG LTYAALKLVE
RRTRENGPTT IDGEAAVEEA LSATGASKLI LTPADEGNAA SLRNRAQDVL WGTTERKTRW
KDVEERAISN VRWPWLPPKS LDEIKRTAVS IGEWRDSGDG YIEKGPFPQA KTSVKVVTRA
YNDDTGMATI EPTPVDAGPN ARVHFAPTKD VSGSSPVVPD TIFDRDDTVL WFLAVDPDGK
HETGDPVKWS NTLTLTHQPK EVMGKRTVEL TVKPRGTIRW NIDGTNAREG KAYSGPIALN
GDDEVKIYAY AEDAGVEVTK VFPIRAAAED EFKIDPELPV AIKKRQKIVS TKDVFATLKA
LKEARGLLKG SLSATVGQGD VNATTRFGPQ TNLNSAAIET FLGAARLSIA QEAAEVEIGF
SEVHFETGRE MEEFVKAVGW IVSPNEVEQQ
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