| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4886 |
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| Symbol | |
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| ID | 3973688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5453549 |
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| End bp | 5454211 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637927998 |
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| Product | HhH-GPD |
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| Protein accession | YP_534727 |
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| Protein GI | 90426357 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.301844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC ACCTCAACAC CCAGACCGAT CTCGACGAGG CCGTCAAAGC GCTGGTCAAG
CTGGACCCGC GGCTGAAGCC GGTCTTGAAG CGCGCCGGGA TGCCGACGCT GCGGCGGCGC
GAACCGGGGT TCGGCGGGCT CGCCGCGATC GTCTGCGGCC AGCAATTGTC GGTGGCCTCG
GCGGCGGCGA TCTGGCGGCG GGTGTCGGCG GCGTTCGATC CGTTCCACCA CGACGCGCTG
CGCCGCGCCC GCGCCGACCG GCTCGGCCGG CTGGGACTGT CGGCGGCCAA GATCAAGACC
CTGAAGAATC TGGCGCGGGA ACTGGCCGCC GAGCGCCTCA ATCTCGACGT GCTCGCCGAC
GAGGACGCCG ACGCCGCCCA TGCCAGCCTG ACCGCGCTGC ACGGCATCGG GCCGTGGACC
GCCGACATCT ATCTGTTGTT CTGCCTCGGC CATGGCGACG CCTGGCCGGC CGGCGATCTC
GCGCTGCAGG AGGCGATGCG GATCGGACTC GAACTGCCCG CGCGGCCGAC GCCGAAACAA
ATGGCGCCGC TCGCCGAGCC GTGGCGCCCG CTGCGGGGAG CGGCCGCGCA TCTGTGGTGG
GCCTATTATC ACGCGGTGAA ACAGCGCGAG GGCGTGATCG GGAAGGCCGC GGCCAAAATT
TGA
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| Protein sequence | MTVHLNTQTD LDEAVKALVK LDPRLKPVLK RAGMPTLRRR EPGFGGLAAI VCGQQLSVAS
AAAIWRRVSA AFDPFHHDAL RRARADRLGR LGLSAAKIKT LKNLARELAA ERLNLDVLAD
EDADAAHASL TALHGIGPWT ADIYLLFCLG HGDAWPAGDL ALQEAMRIGL ELPARPTPKQ
MAPLAEPWRP LRGAAAHLWW AYYHAVKQRE GVIGKAAAKI
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