| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4854 |
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| Symbol | |
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| ID | 3973597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5414684 |
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| End bp | 5417317 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637927966 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_534695 |
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| Protein GI | 90426325 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.951101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTGGAC CGGACGAGCC GCCTTTGACC CTTGCCTTCG ACACCCCGCT GCCGATCGAC
GCCGTGCTGG ATCGGCTCGG CTCCGCGCTG GCCGCCAATA ACGTCGCGGT GCTGGTGGCG
CCGCCCGGCG CCGGCAAGAC CACGCGGGTG CCGCTGGCGC TGCTCGACGC GCCCTGGTTG
GGCGCAAAGA AAATCATCAT GCTGGAGCCG CGGCGGATCG CGGCGCGCGC CAGCGCCGAA
CGGATGGCGA AAACGCTTGG CGAGCGCGTC GGCGACACCG TGGGTTATCG CGTCCGCTTC
GGCAGCAAGG TCTCGCGCGC CACCCGCATC GAAGTGGTCA CCGAGGGCAT CTTCTCGCGG
ATGATTCTCG ACGATCCGGA ATTGAACGGC ATCGCCGCCA TTCTGTTCGA CGAATTCCAC
GAGCGCTCGC TCGACGCCGA TCTCGGCCTC GCGCTGGCGC GCGATGCCCA GGTCGGGCTG
CGCGAGGATC TGCGGATTCT CGTGATGTCG GCGACCATCG ACGGCGCCCG GGTCGGCAAA
TTGCTCGGCG ATGCGCCAGT GATCGAAAGC CTCGGCCGCG CCTACCCGGT CGAGACGCGT
TATCTCGGCC GCAAGCCGGA TGCGCCGCTG GAGCGGCAGA TGGCCGAGGC GATCGCGTCG
GCGTTGCGCG AAAATCCGGG TTCGGTGCTG GCGTTCCTGC CGGGCGCCGC CGAGATCCGC
CGCACCGAGA CGATGCTGCG CGAACGCGTC GTTGATGCCT CAATCGAGAT CGTGCCGCTG
TTCGGCGCGC TCGATGCGAG CGTGCAGGAT CGCGCGATTC AGCCGGCACC GAAGGGGTGC
CGCAAGGTGG TGCTGGCGAC CTCGATCGCG GAAACCTCGC TGACCATCGA GGGCGTCCGC
ATCGTGGTGG ATTGCGGCAT GGCGCGGGTG CCGCGTTACG AGCCGGACAT CGGCCTCACG
CGGCTGGAAA CCGTACGGGC CTCGCGCGCC GCGGTCGATC AGCGTCGCGG CCGCGCCGGG
CGCACCGAGC CCGGCGTATG CTATCGGCTG TGGGACGAGC CGCAGACCGC CTCATTGCCG
GCCTACACCC AGCCGGAAAT CCTCAGCGCC GATCTGTCGT CGCTGCTGCT TGATCTCGCG
CAGTGGGGCG TCGGCGATCC GGCGCAGCTG GCGTTTCTCG ATGCGCCGCC GGCGCCGGCT
TTGAAGGAAG CGCGGGCGCT TCTGGCCGAA CTCGGCGCGC TCGATACTGA GGGCCGCATC
ACCGACGAAG GCAAGAGTCT GCGCGCGCTG GCGCTGCCGC CGCGGCTGGC GCGGATGATT
GTGGATGCGC AGCGGCAAGG CTGCGGCGAG GACGCCGCGG CGATCGCGGC GATCCTCACC
GAGCGCGGGC TCGGCGGCGA CAGCGTCGAT CTCGACGCCA GGCTCGAGCA ATTCCGCCGC
GATCGCTCGC AACGGGCGAT CAGCGCGCGA CAGCTGGCGC AGCGCTGGGC GGCGCCCTCT
GCTCCCTCCC CCCTTGCGGG GGAGGGTCGG GGAGGGGGGT CTACGAGCAC GGCTTCGGTT
CGGGGCACCC CCACCCCCAA CCCCTCCCCG CAAGGGGGAG GGGAGTCGCG CCGTGCTCGC
GGCGAGGCCG CGCCTTCGCA GCAAGGCGCA GGGGAGTTAA CCACCGGCGG CATGTTGGCG
CTCGCCTTTC CCGATCGCGT GGCGAAAAAC CGCGGCAACG GCTCGTTCGT GCTGGCCAAC
GGCCGCGGTG CGGCGATCGA CAAGACCGCC GCATTGGCGC GCGCGCCTTA CATCGCGGTC
GCCGAACTCA CCGGCACCGC GGCGAACGGC AGAATCCTGC TCGCCGCGCC GATCACCCTC
GAGGAGATCG AGGCCCGCTT CGCCGCCGAG ATCGACGCCG TCGACGATAT TTCCTTCGAC
CGCGTCGCGC TGGCGCTGCG CGGCCGTCGC AAGCGCACGC TGCACGCCAT CACGCTGTCG
GAAGCGCCGA TGGCGGTGGT GCCGTCGGAG GCCACCGCGC GGGTTTTTGC CGATGGCCTG
ATTGCCGCCG GGCTCGACAA ACTGCCGTGG TCGAAATCGC TCAAGCAATG GCGCGACCGG
GTGACGTTTT TGCGCAAGGC CGAGGGCGAC GCTTCACAGA AACTTTGGCC GGATCTGTCC
GACGCAGCGC TCGCCGAGGC GCGCGAGGCC TGGCTGGTGC CGGCGCTGTT CGACAAGACC
GCGTTGAAGG ATGTTTCCGC CGGCGATCTG TCCGACGCGC TGATGGGGTT GCTGCCGTGG
GATCTGCGCG CGCGGCTGGA GCGCGAGGCG CCGACCCATT TCGAGGCGCC GACCGGCACG
CAGCTTGCGA TCGACTACGA GGCCGAGCAG GGCCCGACCA TCGCGGTGCG CTTGCAGGAA
TTGTTCGGCC TCACCACGCA TCCCTCGCTC GCCGGCGGCG CGGTGCCGCT GGTGCTGGAA
TTGCTGTCGC CGGCGCAGCG CCCGGTGCAG GTGACGCGCG ACCTGCCGGG GTTTTGGCGC
GGCTCCTATG CCGCTGTGCG CACCGATCTG CGCGGCCGCT ATCCGCGCCA CCCCTGGCCG
GAGGATCCCG CCGGCGCGCC GCCGACCCGG CGCGTCAAGC CGCGCGGCAC GTGA
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| Protein sequence | MLGPDEPPLT LAFDTPLPID AVLDRLGSAL AANNVAVLVA PPGAGKTTRV PLALLDAPWL
GAKKIIMLEP RRIAARASAE RMAKTLGERV GDTVGYRVRF GSKVSRATRI EVVTEGIFSR
MILDDPELNG IAAILFDEFH ERSLDADLGL ALARDAQVGL REDLRILVMS ATIDGARVGK
LLGDAPVIES LGRAYPVETR YLGRKPDAPL ERQMAEAIAS ALRENPGSVL AFLPGAAEIR
RTETMLRERV VDASIEIVPL FGALDASVQD RAIQPAPKGC RKVVLATSIA ETSLTIEGVR
IVVDCGMARV PRYEPDIGLT RLETVRASRA AVDQRRGRAG RTEPGVCYRL WDEPQTASLP
AYTQPEILSA DLSSLLLDLA QWGVGDPAQL AFLDAPPAPA LKEARALLAE LGALDTEGRI
TDEGKSLRAL ALPPRLARMI VDAQRQGCGE DAAAIAAILT ERGLGGDSVD LDARLEQFRR
DRSQRAISAR QLAQRWAAPS APSPLAGEGR GGGSTSTASV RGTPTPNPSP QGGGESRRAR
GEAAPSQQGA GELTTGGMLA LAFPDRVAKN RGNGSFVLAN GRGAAIDKTA ALARAPYIAV
AELTGTAANG RILLAAPITL EEIEARFAAE IDAVDDISFD RVALALRGRR KRTLHAITLS
EAPMAVVPSE ATARVFADGL IAAGLDKLPW SKSLKQWRDR VTFLRKAEGD ASQKLWPDLS
DAALAEAREA WLVPALFDKT ALKDVSAGDL SDALMGLLPW DLRARLEREA PTHFEAPTGT
QLAIDYEAEQ GPTIAVRLQE LFGLTTHPSL AGGAVPLVLE LLSPAQRPVQ VTRDLPGFWR
GSYAAVRTDL RGRYPRHPWP EDPAGAPPTR RVKPRGT
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