Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4818 |
Symbol | |
ID | 3973522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5376507 |
End bp | 5377133 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637927930 |
Product | DSBA oxidoreductase |
Protein accession | YP_534659 |
Protein GI | 90426289 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.228616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.843256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAAG CCGTCGACTA CTATTTTTCG TTGCCGTCGC CCTGGGCCTA TCTTGGCCAC GGGCCGTTTC GCGAGGTCGT AAGTGATTAC GATCTCAAGG TGAATTACAA ACCCGTGGTG CTGGTCGAGC TGTTCGCGGA AACCGGCGGG CTGCCGCTGG CCAAGCGCCA CCCGGCCCGG CAGCGCTACC GGATGGTCGA GCTGCAACGC TGGCGCGCCA AGCGCGGACT GGACTTTCAG CTGCGACCAA AGCACTGGCC GTTCAATGCG CGGCTGGCCG ACGGCGTGGT GATCGCGGCG TGCGAGGCCG GGCACGACCC CGATGTTTTT CTGCGCCGCG CCTATGCGGC TATATGGGAA GCCGAGCTCG ATCTGGCCGA TGCGGCGACG CTGGTCCGGC TCGCCGATCA ATCCGGCCTG CCTGGCGGGG CTTTGGTGGA GCGCGCCGCC AGCGAGGCGA TCGGCTCCAT CTATGAACAG AACCGCCACG ATGCGATCGC CGCCGACGTG TTCGGCTCGC CCGCCTATGT GCTGAATGGC GAGGTGTTCT GGGGCCAGGA CCGCATCGAG CTGTTGGCCG ACGCCTTGAA ATCCGGCCGC GGCCCCTTCC GCTGGCAGGA TTGCTGA
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Protein sequence | MSQAVDYYFS LPSPWAYLGH GPFREVVSDY DLKVNYKPVV LVELFAETGG LPLAKRHPAR QRYRMVELQR WRAKRGLDFQ LRPKHWPFNA RLADGVVIAA CEAGHDPDVF LRRAYAAIWE AELDLADAAT LVRLADQSGL PGGALVERAA SEAIGSIYEQ NRHDAIAADV FGSPAYVLNG EVFWGQDRIE LLADALKSGR GPFRWQDC
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