Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4673 |
Symbol | |
ID | 3972359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5230208 |
End bp | 5232130 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637927785 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_534514 |
Protein GI | 90426144 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCA CTGTGAAAGC CAAACTTGCC GCGACGTTCG GCATCGTGAT CTTGCTCTCA TTGATCGCGG GCGGCGTGGC CTACATGAAG CTCAGCGAAA TGGTCGCGAC GGCTGAAAAC ATCGTGTCGG CCGCGGATCG TGGGACGAAG GCCAACGAGA TCCAACAGGG CATCCTGCTG CAGATTCGGG CTGAGAAGAA CGTCTTGCTG GCTGGCTCCG AAACCCAGGC CGATCAGTAC GCTGCCGATG TCATGGAATT GCGGGCTGGC GTGTTAAAGG CCAAGGACGA AGTTTACGCC GCCGCGACCG AAACGGGGAA GCGACTGCTC GAGCGCTTCT CCACCGCCTA CGCCGCCATG AACACGGCGC AGGAGCAGTC GATCAAACTC GCAAAGGTCG ATCGGGCAAA GGCCATTGAG TTTTCGACGA CGGAAGTTCG CAAGGCCGTC GCCGGGGTTA CGAGCGCCGC AAAGGAATAC CAGGTCTACA TCAAGAAATT GATGTCCGAC CGGGCCGAAC AGGCGCGGGA AGACGGCGCC CGCGCGCAGT TGCTGCTGCT GGTGCTGGTC ATCGCGTCCT TGGTGATTGC GCTGGGATCC GCGATCTGGA TCGCCTTCAA TATCAGCCGC GGGCTCGGCC GCGCGGTCGA TCTCGCCGAC GCCGTCGCGA TCGGCGATCT CAGCAAGAAG ATCGAAGTGT CCAGCAACGA CGAAATCGGC GACCTGGTGA AATCGCTGAA CGCCATGACG GTCAACCTCA ACGCCACCGC CATGATCACC GATACGATCG CCAATGGCGA TCTCTCCACC GATATCAAGC CGTTGTCGGA CAAGGATAGG CTCGGTCTCG CCATGAAGAG GATGGCGGCG AATCTGAAGG CCACGGCAAT AGTCGCCGAT ACCATCGCCA ATGGCGACCT CACCGTCGAT GCCAAGCCGC TGTCGGACAA GGATACGCTC GGCCTGGCGC TGGAGCGCAT GGTCGAGAAG CTGCGCGGCG TCGTGACCGA CTCGGTCACC GCGGCGCAGA ACGTCTCCGC CGGCAGCCAG GAATTGTCCG CCAGCGCCGA GCAGCTGTCG CAGGGCGCTA CCGAGCAGGC CTCCGCCGCG GAAGAAGCCT CGTCCTCGAT GGAAGAGATG GCGGCCAACG TCAAGCAGAA CGCCGAGAAC GCCGGGCAGA CCGAGAAGAT CGCGCACCAA TCGGCCAAGG ACGCCGAGGC CAGCGGCGTC GCGGTCGGCC GTGCGGTGGA GGCGATGCAG ACGATCGCCG GCAAGATCAC CATCGTGCAG GAGATCGCTC GCCAAACCGA TCTGTTGGCG CTGAACGCCG CGGTGGAAGC CGCGCGCGCC GGCGAACACG GCAAGGGGTT TGCCGTGGTC GCCTCCGAAG TGCGCAAGCT CGCCGAGCGC AGCCAGACCG CCGCGGCCGA GATCGGCGCG CTATCGACCG AGACCGTCAA GGCGGCGCAG GAAGCCGGCT CGATGTTGTC GAAGCTGGTG CCCGACATCA AGAGAACCGC GCAACTGGTC GAGGAGATCA CCGCCGCCTG CCGCGAGCAG GACCTCGGCT CGTCGCAGAT CAATCAGGCG ATCCAGCAGC TCGACAAGGT CGGCCAGCAG AATGCCGCGG CGTCCGAGCA GGTGTCGTCG ACCTCCGAGG AACTCGCCTC GCAGGCCGAG CAACTGCAGT CGACCATCGC CTACTTCAAG ATCGATCGTC CGAAGGACGC CGCACAGCCG GCCACACTCG ACAAGGCGGT GGCGCAGCTG CGCGGCAAGG CCGCGGCGAT GGTGTCGCCG CCCCGCGCTG CCAAGAGCGT CGCGACCCGG CCGACGCGTG CGGTGAAGGT TGCTGGTGCC GGCGGCTTCG CGCTGGAGAT GCACGACGCG GCGGACGATC GCGACGCCGA GTTTCATCGC TAA
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Protein sequence | MRFTVKAKLA ATFGIVILLS LIAGGVAYMK LSEMVATAEN IVSAADRGTK ANEIQQGILL QIRAEKNVLL AGSETQADQY AADVMELRAG VLKAKDEVYA AATETGKRLL ERFSTAYAAM NTAQEQSIKL AKVDRAKAIE FSTTEVRKAV AGVTSAAKEY QVYIKKLMSD RAEQAREDGA RAQLLLLVLV IASLVIALGS AIWIAFNISR GLGRAVDLAD AVAIGDLSKK IEVSSNDEIG DLVKSLNAMT VNLNATAMIT DTIANGDLST DIKPLSDKDR LGLAMKRMAA NLKATAIVAD TIANGDLTVD AKPLSDKDTL GLALERMVEK LRGVVTDSVT AAQNVSAGSQ ELSASAEQLS QGATEQASAA EEASSSMEEM AANVKQNAEN AGQTEKIAHQ SAKDAEASGV AVGRAVEAMQ TIAGKITIVQ EIARQTDLLA LNAAVEAARA GEHGKGFAVV ASEVRKLAER SQTAAAEIGA LSTETVKAAQ EAGSMLSKLV PDIKRTAQLV EEITAACREQ DLGSSQINQA IQQLDKVGQQ NAAASEQVSS TSEELASQAE QLQSTIAYFK IDRPKDAAQP ATLDKAVAQL RGKAAAMVSP PRAAKSVATR PTRAVKVAGA GGFALEMHDA ADDRDAEFHR
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