| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4642 |
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| Symbol | |
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| ID | 3972231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5191115 |
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| End bp | 5192761 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927754 |
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| Product | major facilitator transporter |
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| Protein accession | YP_534483 |
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| Protein GI | 90426113 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA TCGAAGGTGC CGGCAAAATT TCCGGCGTAA GGCCGGGACT ACTCGACCGC
GAACGCATCA TCGCGCAGGC CGGCTACAAT CGCTGGCTGG TGCCGCCGGC GGCGCTGTGC
ATCCATCTGT GCATCGGCAT GGCCTATGGC TTCAGCGTGT TCTGGCTGCC GCTGTCGCGC
GCGGTCGGCA TCAACGCGCC GAAGGTCTGC ACCGACATGA GCATCTTCCA GGAGCTGGTC
ACCACCAGCT GCGACTGGCG GGTGGCGAGT CTGGGCTGGA TGTACACGCT GTTCTTCGTG
CTGCTCGGGG TCTCCGCGGC GATCTGGGGC GGCTGGCTGG AGCGTTCCGG CCCGCGCAAG
GCCGGCTTCG TCTCGGCGAT TTGCTGGTGC GGCGGCTTGG TGCTGGGCGC GATCGGCATC
TACACCCATC AATTGTGGCT GCTGTGGCTC GGCTCCGGCG TGCTCGGCGG CATTGGGCTC
GGGCTCGGCT ACATCTCGCC GGTGTCGACG CTGGTGCGCT GGTTTCCGGA CCGCCGCGGC
ATGGCCACCG GCATGGCGAT CATGGGCTTC GGCGGCGGCG CGATGATCGG CGCCCCGCTC
GCCAACATGC TGCTGAATTA CTTCAAGTCG CCGACCGACG TCGGGGTCTG GCAGACCTTC
CTGGCGATGG CGGCGATCTA CTTCGTGTTC ATGATGATCG GTGCGTTCAG CTACCGGATC
ACGCCGGCGA ACTGGCGCCC CGACGGCTGG ACCCCGCCGG AAAAAGCCAA CGCCTACATC
ACCGCGCATC AGGTGCATCT GCGCGACGCC CACAAGACCC GGCAGTTCTG GATGATCTGG
GCGGTGCTGT GCCTCAACGT CTCGGCCGGC ATCGGCGTGA TCGGCATGGC GTCGCCTATG
CTGCAGGAGA TTTTTGCCGG CAAGCTGATC GGATTGCCGG ACCTGAGTTT CAACCAGCTC
TCGGTCGAAC AGAAGACCGC GATCGCGGCG ATCGCCGCCG GCTTCACCGG GCTGTTGTCG
CTGTTCAACA TCGCCGGAAG ATTCTTCTGG GCCTCGCTGT CCGATCATAT CGGCCGCAAG
AACACCTACT ACACCTTCTT CGTGCTCGGC ATCCTGCTCT ATGCGGCGAT TCCAACGTTT
GCGGCGATGG GCAGCAAGGT GCTGTTCGTA GCTGCCTTCG CGGTGATCCT GTCGATGTAT
GGCGGCGGCT TCGCCACGGT GCCGGCCTAT CTCGCCGATA TCTTCGGCAC CCAGTTCGTC
GGCGCCATCC ACGGCCGGCT GCTGACCGCC TGGGCGACCG CCGGCATTAT CGGCCCGGTG
GTGGTGAACT ACATCCGCGA GGCGCAGATC AGTGCCGGCG TGGAGCGCGC CCAGGTCTAC
GACTTCACCA TGTACATCCT CGCCGGGATG CTGGTGCTGG GGCTGATCTG CAATGCGCTG
GTACGGCCGC TCGCCGACAA GTGGTTCATG AAGCCGGAAG AGGTGCTGGC GCTGCAGGCC
AAGGGCGCAA CCGTTGCCAG CGGCGGCTCG CATGGCATCG GCAAGGGCGG CTTCGATGCC
CGCGCCGCTG CGTTCTGGGC CTTCGTTGGC CTTCCGCTGG CCTGGGGCGT CTGGATCACG
CTGCAGAACG CGATCAAGAT CTTCTGA
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| Protein sequence | MTTIEGAGKI SGVRPGLLDR ERIIAQAGYN RWLVPPAALC IHLCIGMAYG FSVFWLPLSR
AVGINAPKVC TDMSIFQELV TTSCDWRVAS LGWMYTLFFV LLGVSAAIWG GWLERSGPRK
AGFVSAICWC GGLVLGAIGI YTHQLWLLWL GSGVLGGIGL GLGYISPVST LVRWFPDRRG
MATGMAIMGF GGGAMIGAPL ANMLLNYFKS PTDVGVWQTF LAMAAIYFVF MMIGAFSYRI
TPANWRPDGW TPPEKANAYI TAHQVHLRDA HKTRQFWMIW AVLCLNVSAG IGVIGMASPM
LQEIFAGKLI GLPDLSFNQL SVEQKTAIAA IAAGFTGLLS LFNIAGRFFW ASLSDHIGRK
NTYYTFFVLG ILLYAAIPTF AAMGSKVLFV AAFAVILSMY GGGFATVPAY LADIFGTQFV
GAIHGRLLTA WATAGIIGPV VVNYIREAQI SAGVERAQVY DFTMYILAGM LVLGLICNAL
VRPLADKWFM KPEEVLALQA KGATVASGGS HGIGKGGFDA RAAAFWAFVG LPLAWGVWIT
LQNAIKIF
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