Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4595 |
Symbol | |
ID | 3971894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5128514 |
End bp | 5129407 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637927706 |
Product | LysR family transcriptional regulator |
Protein accession | YP_534436 |
Protein GI | 90426066 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.645659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAATCCA GCCAGTTGCG GTGCTTTCTC GAAGTGGCGG AGACGCTGCA TTTCACCCGT GCGGCGGAGC GGCTGCATCT CAGCCAACCC GCGCTCAGCA CCCAGATCGA GAAGCTCGAA CGTGAGCTCG GCGTCGATCT GTTCGAGCGC TCGCACAAGA AGACCACGCT GACCTATTCC GGCACGCTGT ATCGCGAGGA GGCTCGAAAG ATCCTCGCAC TCGGCAGCCG CGCGGTCGAG CGGGCGCGGC AGGCGGCGGC CGGCCAGATC GGTCGGCTGC GGATCGGCTT CATCTCCACC GCGGCGGCCT ACGTCATCCC GCAGCTGGTC TCCGACTTCC GCAAGCAGGC GCCGAATGTC GAACTCGACC TGCGCCACTA TCTGACCGCC CAGCAGGTCA ACCTGCTGTG CGGCGGCGAA CTCGATATCG GCTTCCTGCG TATTCCGCTG CGCGAGCCGC GCGGCTTGTC GACCATTCTG GTTCACGAAG AACCGTACAA GCTGTTCCTG CCGGCAACGC ATCCGCTGGC TTCGCAGGCC CGGCTCGAGC TGCAGGATCT CGACGGCGCC GAATTCGTCA CCTATTCGAA GCTGAATGCG CCGGGCTTCG CCGAGACGCT GGCCACGGTG ATGCTGCAGG CCGGGATCAG GCCGGCCGCC ACCCATGAGG CCAGCGATAT GTACTCGCTG ATCTCGCTGG TCTCCGCCGG GGTCGGCATC GCCATTGCGC CGGCCTCGCT GCAGAACTAT CGGCTGCCGA ATCTGGTGAT CCGCGATCTG CAGGGCATCC GCCCTTCCGA GGTGGCGCTG GCGCATCGCG ACGGGATCGA CCATCCCGCC GCGCTGGCCT TCATCCGCGC GGCGCGCGTA ATGTCGGACT TCATCAAGCG GTGA
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Protein sequence | MESSQLRCFL EVAETLHFTR AAERLHLSQP ALSTQIEKLE RELGVDLFER SHKKTTLTYS GTLYREEARK ILALGSRAVE RARQAAAGQI GRLRIGFIST AAAYVIPQLV SDFRKQAPNV ELDLRHYLTA QQVNLLCGGE LDIGFLRIPL REPRGLSTIL VHEEPYKLFL PATHPLASQA RLELQDLDGA EFVTYSKLNA PGFAETLATV MLQAGIRPAA THEASDMYSL ISLVSAGVGI AIAPASLQNY RLPNLVIRDL QGIRPSEVAL AHRDGIDHPA ALAFIRAARV MSDFIKR
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