| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4498 |
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| Symbol | |
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| ID | 3972413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5009272 |
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| End bp | 5011263 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927609 |
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| Product | carbon-monoxide dehydrogenase, catalytic subunit |
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| Protein accession | YP_534340 |
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| Protein GI | 90425970 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1151] 6Fe-6S prismane cluster-containing protein |
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| TIGRFAM ID | [TIGR01702] carbon-monoxide dehydrogenase, catalytic subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.325797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCTGCC TCGATTGTAA CACCTGCTCG TCCGATCCGG CCGCCGTCCA GATGCTGGCG
GTGGCCGAAG CCAACAACAT CGGCACGGCA TGGAGCCGTC ATGCTCAGCA GCAGCCGCAA
TGCGGCTTCG GCACCACCGG GCTGTGTTGC CGGATCTGTC TGAAGGGACC GTGCCGGATC
GATCCGTTCG GCCAGGGCCC GCAATTCGGC ATCTGCGGCG CCGACCGCGA CACCATCGTC
GCGCGCCACC TGGTCCGCAT GATGGCCGCC GGCGCCGCGG CGCATTCCGA GCACGGCCGC
CACATCGCGC TGGCGATGCT GCATCTCAGC CAGGGCCACC TGCACGACTA TTCGATCCGC
GACGAAGAGA AATTGTTGGT GGTCGCCAAG CGGCTTGGCG TCGCGACCGA GGGCCGCGAT
CTGATGACCA TCGTGCGCGA ACTCGCCGAT CTCACGCTGC ACGATTTCCA GAATCAGAAC
TACGACGAGC CGTGCCATTG GCTGGCGGCG TCGCTGCCGG CGCCGCGGCT AAAGAAGCTC
GGCGATCTCG GACTGTTGCC GCACAATATC GATGCGGCGG TGGCGCAGTC GATGTCGCGC
ACCCATCTCG GCTGCGACGC CGATCCGACC AATTTGATCC TCGGCGGCTT GCGCGTGGCT
TTGGCCGACC TCGACGGCGA GATGCTGGCG ACCGAACTGT CGGACGCCTT GTTCGGCACG
CCGAAGCCGA TCGTCACCAC GTCGAATCTC GGTGTCATTA AGCGCGACGC CGTCAACGTC
GCGGTCAATG GCCACAACCC GCTGTTGTCC GACATCATCT GCGACATCGC CGCCGATCTG
AACGACGAAG CGATCGCCGC CGGCGCCAAG GACGGCATCA ACATCATCGG CATTTGCTGT
ACCGGCAACG AGGTGATGGT GCGCCACGGC ATTCCGCTCG CCACCAACTA TCTGTCGCAG
GAACTGCCGA TCCTGACCGG CGCGCTCGAC GCCATGGTGC TGGACGTGCA GTGCATCATG
CCGTCGCTTC CGCGGGTTGC GGAATGCTTC CACACCAAGA TCATCACCAC TGACAAGCAG
AACAAGATCG CCGGCGCAAC GCATATGGAT TTCCAGGAAG CCAAGGCCTC GGAAAACGCC
AAGTCGATCG TGCGGATGGC GATCGAGGCG TTCAAGCACC GCGATCCGCG GCGGATCCAG
ATCCCCAACA TCACCCAGCA GGCGATCGTC GGATTCAGCA CCGAGGCGAT CGTGGCGGCG
CTCGCCACCA TCAACGCCGC CGATCCGCTG CAGCCTTTGG TCGACAACAT CGTCAACGGC
AATATCCAGG GCGTGGTGCT GTTCGCCGGC TGCAACAACA CCAAGACCCA GCAGGACAGC
GCCTATATCG CGATCGCCCG CTCGCTGGCC AAACGTAACG TACTGGTGCT GGCGACCGGC
TGCGCCGCCG GCGCCTATGC CAAGGCCGGC ATGATGACGC AGGATGCCAC CCGGCAATAT
GCCGGCGAGG GCCTGAAGAG CGTGCTGACC GCGATCGGCG AATCCGCCGG CCTCGGCGGG
CCGCTGCCGC TGGTGCTGCA TATGGGCTCC TGCGTCGACA ACAGCCGCGC CGTGGCGCTG
GCCACCGCGC TCGCCAACAA GCTCGGCGTT GATATTTCCG ATCTGCCGCT GGTGGCCTCG
GCGCCGGAAG CGATGACCGA AAAGGCCGTG GTGATCGGCA GCTGGGCGGT CGCGCTCGGC
ATCCCGACCC ATCTCGGCAC GGTGCCGCCG ATCGTCGGCT CCGACGTCGT CAGCCAGCTC
GTCACCACCA CGGCGCGCGA CCTGCTTGGC GGCTACTTCA TCGTCGAGAC CGATCCGGAA
CTCGCCGCGG ACAAGATGTT CGCCGCGATC CAGGAGCGTC GCGACGGCCT CGGCATCCAG
ACCCTGGCGG TGGCGCCGAT CGCCGCGCTG GCCGCAGCGA AGCGCCCGGT GCTGCCTGCG
AGGTTGACAT GA
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| Protein sequence | MACLDCNTCS SDPAAVQMLA VAEANNIGTA WSRHAQQQPQ CGFGTTGLCC RICLKGPCRI
DPFGQGPQFG ICGADRDTIV ARHLVRMMAA GAAAHSEHGR HIALAMLHLS QGHLHDYSIR
DEEKLLVVAK RLGVATEGRD LMTIVRELAD LTLHDFQNQN YDEPCHWLAA SLPAPRLKKL
GDLGLLPHNI DAAVAQSMSR THLGCDADPT NLILGGLRVA LADLDGEMLA TELSDALFGT
PKPIVTTSNL GVIKRDAVNV AVNGHNPLLS DIICDIAADL NDEAIAAGAK DGINIIGICC
TGNEVMVRHG IPLATNYLSQ ELPILTGALD AMVLDVQCIM PSLPRVAECF HTKIITTDKQ
NKIAGATHMD FQEAKASENA KSIVRMAIEA FKHRDPRRIQ IPNITQQAIV GFSTEAIVAA
LATINAADPL QPLVDNIVNG NIQGVVLFAG CNNTKTQQDS AYIAIARSLA KRNVLVLATG
CAAGAYAKAG MMTQDATRQY AGEGLKSVLT AIGESAGLGG PLPLVLHMGS CVDNSRAVAL
ATALANKLGV DISDLPLVAS APEAMTEKAV VIGSWAVALG IPTHLGTVPP IVGSDVVSQL
VTTTARDLLG GYFIVETDPE LAADKMFAAI QERRDGLGIQ TLAVAPIAAL AAAKRPVLPA
RLT
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