Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4282 |
Symbol | |
ID | 3971562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4779924 |
End bp | 4780775 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637927391 |
Product | hypothetical protein |
Protein accession | YP_534125 |
Protein GI | 90425755 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1605] Chorismate mutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.588567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0727138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACTT TGCCTCCCTC GCCGCCGTCG CTGGCGGATC TGCGCCGCGA AATCGATAGT ATCGACGAGC AGGTCCACAA CCTGCTGATG CAGCGCGCCG ACATCATCGA CCGGCTGATC TCGGTGAAGC AGACCCAGGA GGTCGGCTCC GCGTTCCGCC CGGCGCGCGA GGCCGACATG ATGCGCCGGC TGGTGCAGCG CCATCACGGC ATCCTGCCGC TCGATACCGT CGAGAGCATC TGGCGGGTGA TCATCGCCAC CTTTACTTAT GTGCAGGCGC CGTTCGCCGT GCATGCCGAT CTGTCGCTGG GCGAATCCGC GATGCGGGAT TCCGCCCGCT TCCATTTCGG CTTCACCGTG CCGTTCGTGC CGCATTTTTC CGCCCAGGCC GCCGTCGACG GGGTGTCGCG TTCGAAAGGC GATCTGGCGC TGGTCTCGGC CACCTCGAGC CGCACGCCGT GGTGGCTGGC GCTGGAAGCC GAGGGGACGC CGAAGATCAT CGCCAGGCTG CCGTTCATCG AGCGCGCCGA CCATCCGGCG GCGTTGCCGG TGTTCGTGGT CTCCAGGGTC GCCGACAGCG CCATGGTCAC CGAGGTCGAG ATGTGGAGCG TGCGGGTGTC CGGCTGGAAC GCCGAGATCG CCCGGGCGCT GTCGCCCTTG GCCGAGATCG TCGCGGTGCC GGATACCGCC TTCGACGGCG CCGCGCTGCT GATTTCGATC ACCGGCACCA CCAGCCTCGA CGCCGTCAAG ACGGCGCTGA TCGATTCCGG CGCCTCGCTG CGCTCGCAGG CCCTCGTCGG CAGCCATGCA ACCCGTTATA TGGTGCCCCC GACCGGCGCG CCAAAAAGCT GA
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Protein sequence | MSTLPPSPPS LADLRREIDS IDEQVHNLLM QRADIIDRLI SVKQTQEVGS AFRPAREADM MRRLVQRHHG ILPLDTVESI WRVIIATFTY VQAPFAVHAD LSLGESAMRD SARFHFGFTV PFVPHFSAQA AVDGVSRSKG DLALVSATSS RTPWWLALEA EGTPKIIARL PFIERADHPA ALPVFVVSRV ADSAMVTEVE MWSVRVSGWN AEIARALSPL AEIVAVPDTA FDGAALLISI TGTTSLDAVK TALIDSGASL RSQALVGSHA TRYMVPPTGA PKS
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