Gene RPC_4282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4282 
Symbol 
ID3971562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4779924 
End bp4780775 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content68% 
IMG OID637927391 
Producthypothetical protein 
Protein accessionYP_534125 
Protein GI90425755 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.588567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0727138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTT TGCCTCCCTC GCCGCCGTCG CTGGCGGATC TGCGCCGCGA AATCGATAGT 
ATCGACGAGC AGGTCCACAA CCTGCTGATG CAGCGCGCCG ACATCATCGA CCGGCTGATC
TCGGTGAAGC AGACCCAGGA GGTCGGCTCC GCGTTCCGCC CGGCGCGCGA GGCCGACATG
ATGCGCCGGC TGGTGCAGCG CCATCACGGC ATCCTGCCGC TCGATACCGT CGAGAGCATC
TGGCGGGTGA TCATCGCCAC CTTTACTTAT GTGCAGGCGC CGTTCGCCGT GCATGCCGAT
CTGTCGCTGG GCGAATCCGC GATGCGGGAT TCCGCCCGCT TCCATTTCGG CTTCACCGTG
CCGTTCGTGC CGCATTTTTC CGCCCAGGCC GCCGTCGACG GGGTGTCGCG TTCGAAAGGC
GATCTGGCGC TGGTCTCGGC CACCTCGAGC CGCACGCCGT GGTGGCTGGC GCTGGAAGCC
GAGGGGACGC CGAAGATCAT CGCCAGGCTG CCGTTCATCG AGCGCGCCGA CCATCCGGCG
GCGTTGCCGG TGTTCGTGGT CTCCAGGGTC GCCGACAGCG CCATGGTCAC CGAGGTCGAG
ATGTGGAGCG TGCGGGTGTC CGGCTGGAAC GCCGAGATCG CCCGGGCGCT GTCGCCCTTG
GCCGAGATCG TCGCGGTGCC GGATACCGCC TTCGACGGCG CCGCGCTGCT GATTTCGATC
ACCGGCACCA CCAGCCTCGA CGCCGTCAAG ACGGCGCTGA TCGATTCCGG CGCCTCGCTG
CGCTCGCAGG CCCTCGTCGG CAGCCATGCA ACCCGTTATA TGGTGCCCCC GACCGGCGCG
CCAAAAAGCT GA
 
Protein sequence
MSTLPPSPPS LADLRREIDS IDEQVHNLLM QRADIIDRLI SVKQTQEVGS AFRPAREADM 
MRRLVQRHHG ILPLDTVESI WRVIIATFTY VQAPFAVHAD LSLGESAMRD SARFHFGFTV
PFVPHFSAQA AVDGVSRSKG DLALVSATSS RTPWWLALEA EGTPKIIARL PFIERADHPA
ALPVFVVSRV ADSAMVTEVE MWSVRVSGWN AEIARALSPL AEIVAVPDTA FDGAALLISI
TGTTSLDAVK TALIDSGASL RSQALVGSHA TRYMVPPTGA PKS