| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4209 |
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| Symbol | |
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| ID | 3972664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4681217 |
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| End bp | 4681960 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637927311 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_534052 |
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| Protein GI | 90425682 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.351821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.500614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC GAATTGCGAT CTTCGGCGCG GCGTCGGGGA TTGCCGTTCA GGTCGCGCGG
CTCTATGCGG AGCGCGGCGA CTCGCTGGTG CTGATCGGAC GAAGCGACGA AACACTGTCG
AGCATCGCCC AAGACCTGAC GGTGAGAGGC GCGCCGCGGG TGCAGACTAT CCTCGCGGAC
TTTGCTTCGC TCGAGCAACT TCCCGATGTG CTGGCTAGCG CCTGGAATGC GTTCGACGGC
TTGGACATTG CGGTTGTTGC CTACGGCACT TTGCCGGATC AGAAAACTAC GGAGGTCAAT
TCGGCTGCGC TGATTAACGC GCTACTTATT AATTTCGCGA GCCCGGCGGT CGTGGTCAAT
ATGCTTGCGG AGCGCTTCCA ACCGCGAGGC GCAGGAACTA TTGCGGTCAT CACATCGGTG
GCGGGAGAGA GAGGTCGGCA GAGCAATTAT GCATACGGCT CCGCGAAGGG CGGGCTACAG
CGGTTCCTCG AGGGTGTGAG ACATCGGTTG AAGCCGGCGG GTATTGCCGT CATCGATATC
AGGCCTGGAT TCGTATCCAC ACCGATGACA TCGCATCTCG ACCAACGCGG ATTGATGTGG
GCTCGTCCGG AAAGAGTTGC CAAGGACATC GTCGCTTCGA TCGATCACAA GGTAGAAATC
GTCTACACGC CGACGTTCTG GCGCTGGATC ATGTTGGCGG TGCGCAACCT GCCGCGTCCG
CTGTTTCACC GTACGAAGCT GTGA
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| Protein sequence | MTRRIAIFGA ASGIAVQVAR LYAERGDSLV LIGRSDETLS SIAQDLTVRG APRVQTILAD
FASLEQLPDV LASAWNAFDG LDIAVVAYGT LPDQKTTEVN SAALINALLI NFASPAVVVN
MLAERFQPRG AGTIAVITSV AGERGRQSNY AYGSAKGGLQ RFLEGVRHRL KPAGIAVIDI
RPGFVSTPMT SHLDQRGLMW ARPERVAKDI VASIDHKVEI VYTPTFWRWI MLAVRNLPRP
LFHRTKL
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