| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4098 |
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| Symbol | |
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| ID | 3973187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4551760 |
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| End bp | 4554024 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927202 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_533943 |
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| Protein GI | 90425573 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAAAGC ATCTCTATGC GTTGCGTTTA ACTGTTGCGT CGGGCGCGCT CGCGCTCGGC
TTGATGTCGA CCGATGTCGC GTTGGCGCAG CAATCCTCAA CAACAATCGC CGGCGAATCC
GCATTGCCGC CGGTGGTGGT GAATTCGCAA AAGCCGCGCC GCGCCGCGCC GACGCGCCAC
GTTCGCGCCG CGCCGGCGGC GGCCGCCCGT GCGCCGCAGG CCAAGCCCGC GCCAACCTTG
GTGGAAAATC CGCGCGGCCC GATCCAGGGC TACGTCGCCA GCCGCTCGAT GGCCGGCACC
AAGACCAACA CCGCGATCAA CCGCACCCCG CAGGCGGTCT CGGTGATCGG CGCCGAACAG
ATCCGCGACC AGAAGCCCGG CAAGCTCGAC GAGGCGCTGC GCTATTCCGC AGGCTTGGTT
GCAGGCACCT TCGGCACCGA CACCCGCAGC GACTGGTTTC TCATTCGCGG CTTCAAGTCG
AACGACAACA GCACGTTCCT GGACGGCATG CAGCTGTTCT CGACCGCTTA CGCGACCTGG
AAGTTGCAGC CGTTCAATTT GGAACGCATC GAGGTGCTGC GCGGGCCATC GGCGATTCTC
TATGGCGGCT CCAGCCCCAG CGGCATCGTC AATGCCGTCA GCAAGATGCC GCCGGCGGAG
CCGATCCGCT ACATCGAGAG CGGCGTCAAC AATTACGGCA ACCGCTACGT CGCGTTCGAT
GTCGGCGGTC CTGTCGCCAC CGCCGCGGAA AACGGCAAGC TGTTCACCCG GCTGGTCGGG
CAATTTCAGG GCGGCGACAC CCAGGTCGAC CACACCGTGG ACAACAACTA CTTCATCGCG
CCGTCGGTGA CCTGGAAGCC CGATGCCGAC ACCAGCCTCA CCGTGCTGGC CTCCGCCGCC
AAGAACGTCA CCAACGGCCA GAACTTCCTG CCCTATGAGG GCACGGTGGT GGCGGCGCCG
TTCGGCCGGA TCTCGACCAA GCTGTTCACC AGCGAACCCA GCCTGGACAC TTTCAAGCGC
ACCCAGGCGA CGATCGGCTA CCAGTTCGAA CGCAACCTGA CCGACGATCT GACGTTCCGG
CAGAATGCGC GCTTTGCGCA TGTCGACGTC ACCGAGGCGA CCGACTACGG CTTCGGCTAT
TCCGGCGCGT CGTCGTCGGC AAATCTGACA AGGTTCAATT TCTACGCCCA CGACGTCGCT
GATCAAGCCA CGCTCGATAA CCAGCTGGAA TATCGCTTCG CCACCGGCGC GCTCAGTCAT
ACAGCGCTGT TCGGCGTCGA TCTCAAGCAT TACAGCATCG ACGACGTGCA GCACTTCAGT
TTCGGCACGC CGCTCAATCT GGTCAATCCG GTCTACACTC CGACCGCGGT TGCCAGCGGC
GCGTTCAAGG ATCAGACCCT GACCCAGAAG CAACTCGGTC TGTATGCGCA GGACCAGATC
AAGCTCGATC GTTTCACGCT GGTGCTGAGC GGCCGCAACG ATTGGGTCAA AACCGAGAAC
GCGGATCGCA TCGGCGCCGA CCTGTCGCGC GACGACAGCA AGTTCTCGGG CCGTGCCGGG
CTGATCTACA ATTTCGACAG CGGGCTCGCG CCTTACGTCT CCTACGCCAC CAGCTATGAT
CCGATCATCG GCACCAACAC CTCGGCGGGA TTGCCCGGTT CGTTGTATGT GCCGGAGACC
GGGCAGCAGA CCGAAATCGG CGTCAAATTT CAGCCGGTCG GCTTCAACGG CCATTTCGGC
GTCGCGCTGT TCGACCTGAA GCGGCAGAAC GTTCTCACCA CCGATCCGAA CGTCGCGGTG
CTCTCGACCC AGACCGGCGA GGTCACCTCG CGCGGGCTCG AACTCGAGGC GGTCGCCAAT
CTGGCGCCGG GCTTCAAGGT GATGGGCTCG TTCACCACCA CCAACATCTT CGTCAGCAAG
GATGGCAACG CGGCGTTGAT CGGCACGGTG CCGACCAACA CGCCGCGACA GCTGACCACG
GGGTGGGCGG ACTACACGTT CCAGGACGGC GCGCTCGCCG GCTTCGGCTT CGGCGGCGGC
GTGCGCTATG TCGGCTCGTC ATTCGCCGAT CAGGCCAATA CGTTGACGGT GCCGGCGGTG
GTGCTCGGCG ACGCCGCGAT CCATTACGAG CGGCAGAACT GGCGGCTGGC GCTGAACGTC
ATCAACATCA GCGACGAGAC CTATGTGGCG AGCTGTCAGT CCGCCAGCGT GTGCTTCTAC
GGCGACCGCC GCCGCGTCAC CGCCAGCGTC GGCTACAAAT GGTGA
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| Protein sequence | MSKHLYALRL TVASGALALG LMSTDVALAQ QSSTTIAGES ALPPVVVNSQ KPRRAAPTRH
VRAAPAAAAR APQAKPAPTL VENPRGPIQG YVASRSMAGT KTNTAINRTP QAVSVIGAEQ
IRDQKPGKLD EALRYSAGLV AGTFGTDTRS DWFLIRGFKS NDNSTFLDGM QLFSTAYATW
KLQPFNLERI EVLRGPSAIL YGGSSPSGIV NAVSKMPPAE PIRYIESGVN NYGNRYVAFD
VGGPVATAAE NGKLFTRLVG QFQGGDTQVD HTVDNNYFIA PSVTWKPDAD TSLTVLASAA
KNVTNGQNFL PYEGTVVAAP FGRISTKLFT SEPSLDTFKR TQATIGYQFE RNLTDDLTFR
QNARFAHVDV TEATDYGFGY SGASSSANLT RFNFYAHDVA DQATLDNQLE YRFATGALSH
TALFGVDLKH YSIDDVQHFS FGTPLNLVNP VYTPTAVASG AFKDQTLTQK QLGLYAQDQI
KLDRFTLVLS GRNDWVKTEN ADRIGADLSR DDSKFSGRAG LIYNFDSGLA PYVSYATSYD
PIIGTNTSAG LPGSLYVPET GQQTEIGVKF QPVGFNGHFG VALFDLKRQN VLTTDPNVAV
LSTQTGEVTS RGLELEAVAN LAPGFKVMGS FTTTNIFVSK DGNAALIGTV PTNTPRQLTT
GWADYTFQDG ALAGFGFGGG VRYVGSSFAD QANTLTVPAV VLGDAAIHYE RQNWRLALNV
INISDETYVA SCQSASVCFY GDRRRVTASV GYKW
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