| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4065 |
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| Symbol | |
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| ID | 3973346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4515035 |
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| End bp | 4516009 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927169 |
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| Product | respiratory-chain NADH dehydrogenase, subunit 1 |
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| Protein accession | YP_533910 |
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| Protein GI | 90425540 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0444558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGCA TGGCGCTCAC CGCGATCATC TCCACCATGC TGATCATGGT GCTGCTGGTG
GTCGCCGGCA CCTTCACCTG GGTGGAGCGC CGCGTGCTCG GCTTCGTGCA GGAGCGGCTC
GGCCCCAACC GCGTCGGCCC GTTCGGTTTC CTGCAATGGG TCGCCGACAC CGTGAAGATT
TTGACCAAGG AGGATCGGCC GCCGCCGGGT GCGGATCGCG TCGCCTATAT TCTGGCGCCG
ATGGTGGCGG CGACGCCGGT GCTCGCCGGC TTCGGCGTGG TGGCGTTCGG CGACGGGCTG
GCGCTGGCAA ACATCGACGT CGGCGTGATG TTCCTGCTCG GCATGATGGG GCTGACGGTC
TATGGCGTGG TGCTCGGCGC GCTGGCCTCG CACAGCCGCT TCGCGCTGAT GGGGGGCCTG
CGCGCCGCCG CGCAGATGCT GGGCTATGAG GCGTTTCTCG GGCTGTCGCT GCTCGGCGTG
GTGATGATCG CCGGCAGCCT GTCGCTGACC GAGATCGTGC ACGCCCAGCG CGACGTCTGG
TTCGTGCTGC TGCAGCCGTT CGGCGCGGCG CTGTTCTGCA TTGCCGGCGT CGCCGCGGCG
CACCGGCTGC CGTTCGATCT ACCGGAATCC GAGAACGATC TGGTCGCGGG CTATCTCACC
GAATACACCG GGATGTCGTT CGGGCTGTTC TTCCTCGGCG AATATCTCGC GGTGCTGCTG
GTCGCATCCT TGGCGGTGAC GCTGTTCTTC GGCGGCTGGC TCGGGCCGGT TTGGCTCGGA
CCGTATCTGC CGGGGCCGAT CTGGTTCGGG CTCAAGGTCG GCGTCATCGC GCTGATCTTC
ATCTGGATCC GCGCCACGTT GCCGCGGCCG CGCTACGATC AACTAGTGCG GTTCGCCTGG
AAGATCGCGC TGCCGCTGGC GCTGGCCAAT CTGCTGCTCA CCGGCCTCAT CGTGGTAGCG
AGGAGCGCGC CATGA
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| Protein sequence | MIGMALTAII STMLIMVLLV VAGTFTWVER RVLGFVQERL GPNRVGPFGF LQWVADTVKI
LTKEDRPPPG ADRVAYILAP MVAATPVLAG FGVVAFGDGL ALANIDVGVM FLLGMMGLTV
YGVVLGALAS HSRFALMGGL RAAAQMLGYE AFLGLSLLGV VMIAGSLSLT EIVHAQRDVW
FVLLQPFGAA LFCIAGVAAA HRLPFDLPES ENDLVAGYLT EYTGMSFGLF FLGEYLAVLL
VASLAVTLFF GGWLGPVWLG PYLPGPIWFG LKVGVIALIF IWIRATLPRP RYDQLVRFAW
KIALPLALAN LLLTGLIVVA RSAP
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