Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4055 |
Symbol | fixK |
ID | 3969304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4505195 |
End bp | 4505884 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637927159 |
Product | transcriptional regulator FixK |
Protein accession | YP_533900 |
Protein GI | 90425530 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAACC AGTCGGTCAG AACTTCGGAC GGCAACGCCA AGTCGGGCAA CACGGCCTTC GCCTCGGGCG ACCAGTTCTC GACGGTAACC GGCCATGCCG GTCTAGTCGC CTCCGAATTT TCCTACCGGA AGGAAGAGGA AATCTACGGC GAGGACGAAA CCTCCGAATA CGTCTATCAA GTGGTATCTG GAGCCGTTCG CAACTACAAG CTGCTGTCCG ATGGTCGCCG CCAGATCGGC GCCTTCTATC TCCCGGGCGA CGTGTTCGGC CTTGAATCGG GGCCGGTGCA TCGGCTGACC GCCGAAGCCA TCGTCGACAC CACGGTCCGC CTGTTGAAGC GCCGCAGCCT GGAACAGGCA GCCGCCACCG ACGTCAATGT CGCTCGCAGC CTGTGGGCGA TGACCGCCGG CGAATTGCGC CACGCCGAAG ATCACATGCT GTTGCTCGGC CGCAAGAATG CGATGGAGCG CGTCGCCAAT TTCCTGCTCG AGATGGATCG CCGCCTCGCC GTCGCTGGCC TGATGGCGCT GCCGATGTGC CGCCGCGACA TCGGCGACTA CCTCGGCCTC ACCCTCGAAA CCGTTTCTCG TGCGCTGTCG CAACTCCATA GCCAGGGCGT GCTTGGCTTC TCCGGAGCCC GGCAGATCGT GCTGCGCAAC CGTCAGCACC TGCACAACAT GGACGCTTGA
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Protein sequence | MLNQSVRTSD GNAKSGNTAF ASGDQFSTVT GHAGLVASEF SYRKEEEIYG EDETSEYVYQ VVSGAVRNYK LLSDGRRQIG AFYLPGDVFG LESGPVHRLT AEAIVDTTVR LLKRRSLEQA AATDVNVARS LWAMTAGELR HAEDHMLLLG RKNAMERVAN FLLEMDRRLA VAGLMALPMC RRDIGDYLGL TLETVSRALS QLHSQGVLGF SGARQIVLRN RQHLHNMDA
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