| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4001 |
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| Symbol | |
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| ID | 3969347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4449338 |
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| End bp | 4450705 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927105 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_533846 |
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| Protein GI | 90425476 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.443077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTCTCC TGGAAGCTCG TTCAGCCACC CCGCTCGCCG GCCTCAAGGC GCGGTTGCGG
GCGATGTTCG GCGGCGGCCA CGAGGCCGCG CTGACCAACC GGCTGGCCGG CACCATCTTC
ATCATCCGCG TGGTCAGCGC CGCCTTGGCG TATCTGTCGC AAGTGCTGCT GGCGCGCTGG
ATGGGCGGCG CGGATTACGG CACTTACGTC TATGTCTGGA CCTGGGTGCT GCTACTCGGC
TCGATGCTGG ATTTCGGCAT CGCGATGTCG TGCCAGAAGA TCATTCCGGA ATATCGCGCC
GCCGGCGCCC ACGCCTTGTT GCGCGGTTTT CTGTCCGGCA GCCGCTGGGC CACGCTGGCG
GCCTCGAGCG CGGTGGCGCT GGCGCTCGCC GGGCTGGTGC GGCTGCTGTC GCCGTGGATC
GATCCGCCGG CCGTGGTGCC GCTGTATCTC GGCTGCCTGA CGCTGCCGGC CTTCGTGGTC
GCCAACACCC AGGACGGCAT CGCCCGCTCG CACGACTGGA TGCGGCTCGG CTTGATGCCG
CAATTCATCG TCCGGCAATC GCTGATCATC GGCTTCACCG CCGGCGCCGT GGTGCTCGGC
TTTCAGCTCG GCGCGGTGGC TGCGATGATC GCCAGCTGCG CCGCGGTGTG GATCGCGATG
CTCGGCCAGC TGCTCGCGCT GAACCGCCGG CTTGAGGGCG TGATCGACCC CGGCCCCAAA
GCCTATGAAT TCCGCAGCTG GCTGAAAACC TCGCTGCCGA TCATGATGGT CGAGGGCTTC
TATCTGCTAT TGTCCTATAT CGACGTCCTG GTGCTGCAGC ATTATCGCTC GGCCGAAGAA
GTCGGGGTGT ATTTCGCGGT GATCAAGACG TTGGCGCTGG TGTCGTTCAT CCACTACGCG
ATGTCGGCGG TCACCGCGCA TCGCTTCAGC GAGTATCACA CGAGCGGCGA CAAGGCGCGG
CTCGCCGCCT ATCTCCGCCA CGCCATCACC TGGACGTTCT GGCCGTCGCT GGCCGCCACC
GTCGTGCTGC TGGCGCTGGG CAAGCCGCTG TTGTGGCTGT TCGGGCCGCA ATTCGTCGCC
GGCTACGACA TCATGTTCAT CGCCGCGATC GGCCTCGTGG TGCGCGCCGC GATCGGCCCG
GTGGAACGGC TGCTCAACAT GCTCGGCCAG CAGAACCTCT GCGCGCTGGC CTATGCGCTG
GCGTTCGCGA TCAACCTCGT GCTGTGCATC GCGCTGGTGC CGCGGTTCGG CGGCCACGGC
GCCGCCGCCG CCACCTCGCT GGCACTCACT TTCGAAACCG TGCTGCTGTT CTGGATCACC
CGCCAGCGGC TCGGCCTGCA CGTGCTGGCG TTCGGCAAGC GGGCCTGA
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| Protein sequence | MALLEARSAT PLAGLKARLR AMFGGGHEAA LTNRLAGTIF IIRVVSAALA YLSQVLLARW
MGGADYGTYV YVWTWVLLLG SMLDFGIAMS CQKIIPEYRA AGAHALLRGF LSGSRWATLA
ASSAVALALA GLVRLLSPWI DPPAVVPLYL GCLTLPAFVV ANTQDGIARS HDWMRLGLMP
QFIVRQSLII GFTAGAVVLG FQLGAVAAMI ASCAAVWIAM LGQLLALNRR LEGVIDPGPK
AYEFRSWLKT SLPIMMVEGF YLLLSYIDVL VLQHYRSAEE VGVYFAVIKT LALVSFIHYA
MSAVTAHRFS EYHTSGDKAR LAAYLRHAIT WTFWPSLAAT VVLLALGKPL LWLFGPQFVA
GYDIMFIAAI GLVVRAAIGP VERLLNMLGQ QNLCALAYAL AFAINLVLCI ALVPRFGGHG
AAAATSLALT FETVLLFWIT RQRLGLHVLA FGKRA
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