Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3944 |
Symbol | |
ID | 3969329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4394093 |
End bp | 4394464 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637927048 |
Product | PilT protein |
Protein accession | YP_533789 |
Protein GI | 90425419 |
COG category | [S] Function unknown |
COG ID | [COG3742] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00101332 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATAGTT CGACGGTGAT TGCGATCTTC CGGCAGGAAC AGGACGCCGC GCAATTTGCG CGACGCATCG CCGAAGACGA CCAGCCAATG ATGTCCGCCG CCAATCTGGT CGAAACCTCG ATTGTACTGC GCGGGCTCAA GGACATCGCG CCGGCCAAGG CCGAACGATG GCTAGACGAC TTCATCGCCG CGGCCGGGAT CAGGATCGAG CCGGTCACGG CCGACCAGGC GCAGCTCGCA CGCTCAGCAC ATCTGCGGTT CGGCAAAGGG ACTGAACATC GCGCAGCGCT GAACTACGGC GACTGCTTCG CCGATGGTCT GGCAAAAGCC ATGGACGCCC CTTGCTATGC AAGGGTAACG ACTTTCCGTT GA
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Protein sequence | MDSSTVIAIF RQEQDAAQFA RRIAEDDQPM MSAANLVETS IVLRGLKDIA PAKAERWLDD FIAAAGIRIE PVTADQAQLA RSAHLRFGKG TEHRAALNYG DCFADGLAKA MDAPCYARVT TFR
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