| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3879 |
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| Symbol | |
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| ID | 3969378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4311912 |
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| End bp | 4312751 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637926985 |
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| Product | transketolase-like |
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| Protein accession | YP_533727 |
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| Protein GI | 90425357 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.521893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTCTGA CAAATCGAGA GATTAGCGAT CTGCGGACGA ATGCAAAAAT TGTTCGTCGC
CTGACGATTG AGTCGATCGC GCATGCGGGT ACCGGTCATG CGGGAAGCTC GCTATCGATG
ATCGAGATTT TGGTCCTGTT TTATTTCAAG CATCTTGCCG TCGACCCGAA GCACCCGCAC
TGGGAGGACC GCGATCGCTT CATCCTGAGC AAAGGTCACG GCGCCCCCGG GCTCTATGCG
ACCCTTGCCC ACGCCGGATA TTTTCCGACC GCCGAGATGG CGACGTTGCG TGGATTGGGT
TCTCGTCTCC AAGGGCACCC GAATGCGGCG GCTCTGCCGG GAATCGACGC GTCGACCGGA
TCCCTCGGAC AAGGCCTGTC GGTCGCGGCC GGGCTCGCCC ACGGGCTGCG CATCCGCGGC
CAGCGCTCGA GGGTCGTTTG CCTGCTGGGT GACGGCGAGA TGCAGGAGGG CCAGAACTGG
GAGGCATTCA TGGTGGCGAA CGCGCTGCGC CTCGGTAACC TGTTGGCCGT CGTCGATCGC
AACGGATTGC AGAACGACGG CCCGACGGAA TCAATCGTTC CACTCGAATC GTTGGTAGCC
AAGGCAGAAG CCTTCGGCTG GCACGGCTGC GAGGTCGATG GCCATGATTT CCAGGCTCTC
AACCATGCCA TCGAGGTGGC ACAATCGCGT CAGGATCGCC CATCACTTAT CGTGGCGCGC
ACCGTCAAGG GAAAGGGCGT CAGCTTCATG GAAGACCAAG TCAAGTGGCA TCATCACCCG
CTATCCCCTG AAGAATACCG TGTTGCGTTA TCCGACATCG AACTGGCGTA CGGTCTATGA
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| Protein sequence | MALTNREISD LRTNAKIVRR LTIESIAHAG TGHAGSSLSM IEILVLFYFK HLAVDPKHPH
WEDRDRFILS KGHGAPGLYA TLAHAGYFPT AEMATLRGLG SRLQGHPNAA ALPGIDASTG
SLGQGLSVAA GLAHGLRIRG QRSRVVCLLG DGEMQEGQNW EAFMVANALR LGNLLAVVDR
NGLQNDGPTE SIVPLESLVA KAEAFGWHGC EVDGHDFQAL NHAIEVAQSR QDRPSLIVAR
TVKGKGVSFM EDQVKWHHHP LSPEEYRVAL SDIELAYGL
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