| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3743 |
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| Symbol | |
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| ID | 3970338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4168327 |
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| End bp | 4169307 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637926853 |
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| Product | aminotransferase, class I and II |
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| Protein accession | YP_533597 |
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| Protein GI | 90425227 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000372169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACG GCGGCGATTT GACGGACGCG ATGGCGCGGC ACGGCGGCGC GCCGCAAGCC
TGGATCGATC TGTCCACCGG CATCAATCCG TGGCCGTGGC CGATTCCCGC GATCGCAGAC
GAGGCCTGGC AGCGGCTGCC GTCGCGTGGC GATGAAGTCG CACTGATCGA CGCCGCGCGC
GCGGCCTATC GCGTGCCCGC GGAGATAGCG ATCGTCGCAG CCTCCGGCAC CCAGGCGCTG
ATCCAGTGGC TGCCGCATCT TGCTGCGCCC GGCGCGGTCG CGATTGTTGG CCCGACCTAC
AGCGAGCACG CGAGCGCGTG GCGCAACGCC GGCCGCGAGG TGATCGCCAT TGATGATGCT
TGCGCATTGC CGAGCAGCGC GCGCCATGCG GTGATCGTCA ACCCGAACAA TCCCGACGGC
CGCGTCGTCG ATCGCGCGCA GCTCGCGGAT GTCGCCGCCG TGCTGCAGGC CCGCGGCGGC
TGGCTGGTGA TCGACGAAGC CTTTGCCGAC GTGACACCTG ACATCAGCGC GACGGCGCTG
TGCGCGGCGT TGCCGATCGT GATCCTGCGC TCGTTCGGCA AGTTCTATGG CCTCGCCGGA
TTGCGGCTCG GCTTCGCGCT GGCCGCACCA TCGATCGCCG ATCGCATCGA AGCTGCGATC
GGGCCGTGGT GCTGCTCCGG ACCGGCGCTG CGGATCGGCG CTGCCGCGCT GCGCGACCGG
GCCTGGGCAG ACGCGACGCG CACCGCCTTG ACGCAACAAG CCATACGTCT CGATGCGGTG
CTGAACAAAG CCGGGCTTAA CGTCGTCGGC GGCACCGCGC TGTATCGATT GACCCGGCAT
CGCGAGGCGT TGCGGATCCA CGATGGCTTG GCGCGACAAC AGATCTGGTG CCGCCGCTTC
GATTGGGCCG ACGATCTGCT GCGGTTCGGC CTGCCTCCGG ACGAGGCCGC ACTGGATCGG
CTGGCGGCTG CGCTGGGATA G
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| Protein sequence | MKHGGDLTDA MARHGGAPQA WIDLSTGINP WPWPIPAIAD EAWQRLPSRG DEVALIDAAR
AAYRVPAEIA IVAASGTQAL IQWLPHLAAP GAVAIVGPTY SEHASAWRNA GREVIAIDDA
CALPSSARHA VIVNPNNPDG RVVDRAQLAD VAAVLQARGG WLVIDEAFAD VTPDISATAL
CAALPIVILR SFGKFYGLAG LRLGFALAAP SIADRIEAAI GPWCCSGPAL RIGAAALRDR
AWADATRTAL TQQAIRLDAV LNKAGLNVVG GTALYRLTRH REALRIHDGL ARQQIWCRRF
DWADDLLRFG LPPDEAALDR LAAALG
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