| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3719 |
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| Symbol | |
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| ID | 3971464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4139653 |
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| End bp | 4140456 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637926829 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_533573 |
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| Protein GI | 90425203 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.961452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAGC AGTCCAGTCT CGCCCGCTAT CTTGCATCCG CAGCTGTGGC GGCGATGCTG
GCGGTGCCGC TTGGTGGCTG CCAGACCACG GGGTCGGACA TCACCGGCTC GATCGGCGGC
AATAAATCGG ATGCCCTGGC CGCCGACCCG AAGGCGGCGG TCGAGGTCTA TGGCGAGCGC
TACCGCGCCA ATCCGAAGAA CGCCGAGGCG GCGTTGCGTT ACGGTCAGGC GTTGCGTGCC
GCGGGGATGC GCTCGCAGGC GGTCGCGGTG TTCGAACAGG CGACCATTGC CAACCCGGGA
AACAAGACCT TGCTGGCCGG CTACGGCCGG GCGTTGGCCG ATGCCGGAAG CTTCCAGCGC
GCCTTCGAGG TGCTCGGCAG CGCGCACACC CCGGAAAATC CCGATTGGCG GATCCTGTCG
GTCCAGGGCA CCACGCTCGA TCAAATGGGG CGGCACGACG ACGCCCGCGG CTATTACGCC
AGTGCGCTAA AGATCAAGCC GGAAGACCCC ACGGTGCTGT CCAATCTGGG GCTGTCTTAC
GTGCTCTCCA AAGAATTGCC CAAGGCCGAG GAGACGCTGC GCCGCGCCTA TGGCGCCGGT
GCCAGCACCG ATCCGCGGGT GCGGCAGAAC TTGGCCCTGG TGGTCGGCCT GCAGGGCCGC
TTCGCCGAGG CCGAGAGCAT CGTGCGGGCC GATCTGCCCG CCGAAGAGGC CGCCGCCAAC
GCCGCCTATC TGCGGCAGAT GCTCAGCCGC AAGGACGGCC CGCGGCTCGG CGCGCAAGAC
GCCGACGCGC CCGGACGCTC CTGA
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| Protein sequence | MRQQSSLARY LASAAVAAML AVPLGGCQTT GSDITGSIGG NKSDALAADP KAAVEVYGER
YRANPKNAEA ALRYGQALRA AGMRSQAVAV FEQATIANPG NKTLLAGYGR ALADAGSFQR
AFEVLGSAHT PENPDWRILS VQGTTLDQMG RHDDARGYYA SALKIKPEDP TVLSNLGLSY
VLSKELPKAE ETLRRAYGAG ASTDPRVRQN LALVVGLQGR FAEAESIVRA DLPAEEAAAN
AAYLRQMLSR KDGPRLGAQD ADAPGRS
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