Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3610 |
Symbol | |
ID | 3971637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4014446 |
End bp | 4015528 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637926717 |
Product | transport system permease protein |
Protein accession | YP_533464 |
Protein GI | 90425094 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.137689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACCT CGCCGCTCAG CGCTGCGCCG GCGCCCCGCG AGGCCAGCAA GGCGGTGGCC CTGGCCTATC AGCGCGTCAT TCGCCGCCGG ATCGGCTTGC TGCTGGTGCT GGCGGTGATC AGCGTCGCCG CCTTCGCGAT CGATCTCGGC ACCGGCCCCT CCAGCCTCGG ATGGGTCGAC GTGATCCGCG GGCTGTGGCA GTCGGGGGCG TTGTCGGGCG CGCACGCCGC GATCCTGTGG GAAGTGCGGC TGCCGCAGGC GCTGCTCGCG GTGCTGGTCG GGCTCGGGCT CGCCACCGCC GGCGCCGAGA TGCAGACCAT CCTCGGCAAT CCCTTGGCCA GCCCGTTCAC GCTCGGCGTG TCCTCGGCGG CGTCGTTCGG CGCGGCATTG GCGATCGTGC TGGGGATCGG GATTCCCGGG GTGCCGCAGA ACTGGGTCAT CTCGGCCAAT GCCTTTGCCT TCGCCTTCGT CTCTGTGCTC GTGCTGCAAT CGGTGGTGCG GATGCGCGGA CCCGGCACCG ACATCCTGGT GCTGTGCGGC ATCGCTTTGT TCTTCACTTT CAATGCCCTG GTGGCGCTGA CGCAATTCCT CGCTAGCCAG CAGGCGCTGC AGCAATTGGT GTTCTGGATC ATGGGCAGCC TGTCGCGGGC CTCCTGGGAC AAGGTGCGGC TGCTCGCGGT TGTTCTGCTG GTGACGCTGC CGTTCTCGCA GCGCGCCGCC TGGCCGATGA TGGCGCTGCG GCTCGGCGAG GATCGCGCCC GCAGCCTTGG CATCAATGTC GGCCGGCTGC GCTTCATGTC GCTGCTGCGG ATAAGCCTGA TGACCGCAAC CGCGATGGCG TTCGTCGGCA CCATCGGTTT CGTCGGTCTG GCCGGGCCGC ATATCGCACG GATGCTGATC GGCGAGGACC ATCGCTTCTT CCTCCCGGCA AGCGCGCTAA CCGGCGCCAT CATCATGTCG CTAGCGTCGG TGGCGTCCAA GAGCATCATC CCCGGCGTGC TGGTGCCGAT CGGGATAGTC ACCGCGCTGA TCGGACTCCC GGTGTTCTTC TCGCTGATCT TCAGCCGGCG AGGCGCGCTA TGA
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Protein sequence | MMTSPLSAAP APREASKAVA LAYQRVIRRR IGLLLVLAVI SVAAFAIDLG TGPSSLGWVD VIRGLWQSGA LSGAHAAILW EVRLPQALLA VLVGLGLATA GAEMQTILGN PLASPFTLGV SSAASFGAAL AIVLGIGIPG VPQNWVISAN AFAFAFVSVL VLQSVVRMRG PGTDILVLCG IALFFTFNAL VALTQFLASQ QALQQLVFWI MGSLSRASWD KVRLLAVVLL VTLPFSQRAA WPMMALRLGE DRARSLGINV GRLRFMSLLR ISLMTATAMA FVGTIGFVGL AGPHIARMLI GEDHRFFLPA SALTGAIIMS LASVASKSII PGVLVPIGIV TALIGLPVFF SLIFSRRGAL
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