| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3595 |
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| Symbol | |
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| ID | 3971622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3995954 |
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| End bp | 3997168 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926705 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_533452 |
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| Protein GI | 90425082 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.766279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.905523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCGG AGCCGGCTGA CGGGAACAAA CGCTCCAGGG AATCTGCCTC CCACGACCAG
GAGCAGGCTC CCCCACCAAC CGACCACGAC GATACGCAGG GTAAGTTGGC CCCCTCGATG
CTGTCGAATC CCTGGTTACG TTGGGGATTG ATCACCGCTG CGATCCTGCT GCTACTTGGT
GGCACCGGCT ATGGCTGGTA TTGGTGGACC ACGGGTAGCT ATTTTCAAAG CACCAATGAC
GCGTATCTCA AGGCGGATCA GGTCTCGATT GCGCCGAACG TCTCGGGCTA TCTAGTTGGG
GTACCGGTGG TCCAAAACCA GACGATCGCG GCTGGCGATC AACTGGCGAA GATCGACGAC
CGTTCCTACC GGGTTCGAGT TGAGCAGGCC AAGGCCCAAC TCGATCAGGC AAGGGCCGGC
AAAGCTCGCG CGGAAGCCGA GTTGAACCGA CAATACGCCC AGATCGAACA GGCGAATGCT
CAGCTTGGGC AATCGGAGGT GAGCCTGGCT TTTGCCGAGA ACCAGGTCGC GCGTTATCGG
CCGTTGGCAG CGAGCGGCGC CGAAGCGACC GAGCGTTACG ACCAGATCCG AAACCAGCGC
GATCAGGCAC GCGCCCAGGT CGCCCTAAAC AACGCGCAGG TCGAGTCGGC GCGTCGGATG
GTCCCCTCAA TCGAAGCGCA AATTGCCGAA GCGCAAGCCG CGATTGAGCA GGCCGAGGCC
CAACTTCATC AAGCGCAAAT CGATCTGGAC AACACGGTGG TGGTCAGCCC GATCGCGGGC
CGCGTCGGCG ACCTGACCGC GCGGGTCGGC CAATTCGTTC AGCCCGGCAT GCGGATGATG
ACCGTCGTCC CGGTCCATGA TCTTTACCTG GAGGCAAATT ATAAGGAGAC CCAGATCGGA
CTGATGCGGG TCGGCCAGCC GGCGACCATC GAAGTCGACG CCCTGCCGAA TGAGAAGCTG
CACGGCGAAG TGCTGAGCTT CTCACCCGGC ACCGGCTCGG AATTCTCGTT GCTGCCGCCG
CAGAATGCGA CCGGCAATTT CACCAAGGTA GTGCAGCGCG TTCCCGTGCG AATCCGGATT
GATGCCGGCC CGGAGGCGCG CAAGGTGCTG GTGCCCGGAC TGTCGATCGT GGTGGATGTC
GATACCCGTA ACGCCAAGGC CGAGATCAAC CGCCAAAGAC GAGAACAGCA AGACAGCCGG
ATCAGCGGGC AATGA
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| Protein sequence | MASEPADGNK RSRESASHDQ EQAPPPTDHD DTQGKLAPSM LSNPWLRWGL ITAAILLLLG
GTGYGWYWWT TGSYFQSTND AYLKADQVSI APNVSGYLVG VPVVQNQTIA AGDQLAKIDD
RSYRVRVEQA KAQLDQARAG KARAEAELNR QYAQIEQANA QLGQSEVSLA FAENQVARYR
PLAASGAEAT ERYDQIRNQR DQARAQVALN NAQVESARRM VPSIEAQIAE AQAAIEQAEA
QLHQAQIDLD NTVVVSPIAG RVGDLTARVG QFVQPGMRMM TVVPVHDLYL EANYKETQIG
LMRVGQPATI EVDALPNEKL HGEVLSFSPG TGSEFSLLPP QNATGNFTKV VQRVPVRIRI
DAGPEARKVL VPGLSIVVDV DTRNAKAEIN RQRREQQDSR ISGQ
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