Gene RPC_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3563 
Symbol 
ID3973763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3959770 
End bp3960708 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content65% 
IMG OID637926674 
Producthypothetical protein 
Protein accessionYP_533421 
Protein GI90425051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG ATCACGACGA CACCAGTTTC GAGCCGCCAC ATGCCGCATC GCCAACCGAC 
CATATCCTGA CCGAGCTGCA GCTGCACGGC TATCGTCCAT TCCAGGACGA ACCCGATCCG
AGGCCGCTGC CCGAAGCACA GCTTATCGCG AACGCCGTGG CCGATATCTT CGATGCGCTT
GTCGCCACCT TGAGCGACAC CCGCCTCGAA CCAGACCTCG TCGATCTGCT GTGGTCCACC
GTCAACCTGT TCCACCGCGC CAACGAACGG ATCGAGCGCG AGCTCGACGA CAATGAGCAG
GCGCAGAAGC GCAGCCAGCG CGACCAGGAC GGCTCTGAAA TCCGCTCGGT CGAACTGGAG
CGCCTCACCG CCGAGGGGAT GACCCTGATC GAGCGCTGCA ACGCCATGGA GCTGTTCCGC
GATCAGGCCG CCGACCATTT CGTCCGCCAC ACCGGATCGC ATTGGCACCC GCGCAGCGGC
TCGCTGGTCA ACCACCGCGC GCTGACCTCG GCTGTGATCG ACAGCCGCGA CTTTATCGCC
GCCCGGCGCC GGGCCGAGAC CGAGGTGCTG TTGCCGGCTG GTCCGAAGAT CGCCGTCACC
GGCGGGCTCG ACTTCAACGA TCACCGGCTG ATCTGGGACA AGCTCGATCA GGTCCATGCC
AAGCACTCCG ACATGGTGCT GCTGCACGGC GGCTCGCCGA AGGGCGCCGA ATTGATCGCC
GCCCGTTGGG CCGATCACCG CAAGGTACCG CAGATCGCCT TCAAGCCGGA CTGGACCCGG
CACGCCAAGG CCGCGCCGTT CAAGCGCAAC GATCAGATGC TCGACGTGCT GCCGATCGGC
GTCATGGTAT TCCCGGGCAC CGGGATCCAG GAGAACATGG CCGACAAAGC CCGCAAGCTC
GGCATTCCGG TCTGGAAATT CGGCGAGCGC GGCGCGTAA
 
Protein sequence
MTNDHDDTSF EPPHAASPTD HILTELQLHG YRPFQDEPDP RPLPEAQLIA NAVADIFDAL 
VATLSDTRLE PDLVDLLWST VNLFHRANER IERELDDNEQ AQKRSQRDQD GSEIRSVELE
RLTAEGMTLI ERCNAMELFR DQAADHFVRH TGSHWHPRSG SLVNHRALTS AVIDSRDFIA
ARRRAETEVL LPAGPKIAVT GGLDFNDHRL IWDKLDQVHA KHSDMVLLHG GSPKGAELIA
ARWADHRKVP QIAFKPDWTR HAKAAPFKRN DQMLDVLPIG VMVFPGTGIQ ENMADKARKL
GIPVWKFGER GA