Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3550 |
Symbol | |
ID | 3973750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3949342 |
End bp | 3949620 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637926661 |
Product | XRE family transcriptional regulator |
Protein accession | YP_533408 |
Protein GI | 90425038 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0545283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAAAT CGTTGCGCAC GCCGCGACAG CGGCAGCTCC AATCCCTGCT CACGGCCGCC CGCAAGAAGA ACGGAATGAC GCAGGCCGAT TTGGCAACAG CGTTGGACAA ACCGCAATCC TTTGTCGCCA AGTATGAGAA CGGTGAGCGA CGAATTGACG TAGTCGAGTT TATCGATATT GCCACTGCGG TGGGAGCTGT TCCCGGGGAA ATTTTGGCGC AAATCCAGTC GGTGGACGAA TCCGCCAAGC GAACAGGTCG CCGGTCCCGC AAAGCGTAG
|
Protein sequence | MPKSLRTPRQ RQLQSLLTAA RKKNGMTQAD LATALDKPQS FVAKYENGER RIDVVEFIDI ATAVGAVPGE ILAQIQSVDE SAKRTGRRSR KA
|
| |