Gene RPC_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3505 
Symbol 
ID3973197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3894786 
End bp3895337 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content59% 
IMG OID637926617 
Productmembrane antigen 
Protein accessionYP_533364 
Protein GI90424994 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3470] Uncharacterized protein probably involved in high-affinity Fe2+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.147958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTA GGGCAGTCGG CGTTTCGCTT CTGGCGACAT GCTTCATCGC CGTCGGTGCG 
ATGGCGAAGG AAGTTCCGAT CGGGACTCCA CAGGAGAAGA GTGGACTGCG CGTCGGCTTG
GTCTATCTCC AGCCCATCGA GATCGACACT CCCGAGCTGA TGCGGGATCC GAAACAGTCG
GACTTGCACA TGGAAGCGGA CATCAAGGCC GCAAAGGGCA ATCCGTGGGG TCTTGAGGAA
GACAGCTGGT TTCCGGGCTT GCTCGTCAAG TATAAGATTA CCAGCGTTGA AAATGGCGAG
GCCGTGGAAG GCGAGCTGAC GCCTGACGTC GCAACGGACG GCTTTGCCTA TTGCAACAAC
ATCAAGCTGC CGAACTCCCG CCCGGTCGGG AAGTACAAGG TGACGCTGAC GGTGCTGCCG
CCGAGCAAGA ACCCGAAGCA GCGCATCGCG CGGCATGTCG ATAAGGAGAA CGGCGTGCCT
GCCTGGTTCG AGCCGCTCTC CCTGGATTAT GAATTCACAT TCGCCGGCAC CGGCAAGAAG
GGCGCGTATT GA
 
Protein sequence
MNFRAVGVSL LATCFIAVGA MAKEVPIGTP QEKSGLRVGL VYLQPIEIDT PELMRDPKQS 
DLHMEADIKA AKGNPWGLEE DSWFPGLLVK YKITSVENGE AVEGELTPDV ATDGFAYCNN
IKLPNSRPVG KYKVTLTVLP PSKNPKQRIA RHVDKENGVP AWFEPLSLDY EFTFAGTGKK
GAY