| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3469 |
|---|
| Symbol | |
|---|
| ID | 3971754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3853369 |
|---|
| End bp | 3854145 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637926580 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_533328 |
|---|
| Protein GI | 90424958 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGGT CGCAACAGAA GTCGGAGTCG GAACCCAACG GCCAGGAGGT GCGCAGTCGG
GAGACCCGCG CGAAGATGAT CGAAGCGGCG ATCGAGCTGT TTGCGACGGT CGGCTACGAG
GCCGCGAGCA CCCGCGCCCT TGCGGAGCAG GCCGGAGTTA ATCAGGCCGC GATCCCCTAC
CATTTCGGCG GCAAGCGCGA ACTGTACCTC GCCGCGGCGC AAACCCTGGC AGAGCACGCC
CGCGAGCGGA TCGCGCCGAT CGTCGCGCAG CTTCGGCAAG CGCATCAGAC GGATCCTCGG
AGCGTGGTGG AGGAGGCGCT GAGACGTGTT TTTCGACTGT TCGCCAGCGG TTCGGAATCC
CTGGCCTGGG TGACGTTTGT CATTCGCTCC CAGTATGAGG CACTGGAAGG TTTTCGCATC
ATCCATGAAG AACTCGCCCC GTTGGAACGC GAACTGAAAC GCGTCATCGG CGAGGCCACG
GGAGAAACGG ACCAGCAACG GCTCGGCATG AAACTAACCG TGGCGCTGGC TCCGATTTTC
AGCTTCCGCC CCCTTCAGCA ATTCAACCTC AGCGTCCTGG GTTGGGACAA GCCCGCGCCG
CATCTGCTCG ACAAGTTCGA AACGGTCATC GTCGAAGCCG CCCTCCGCGA GCTCTTCACC
GAGCTTCCGC AGGCCGTCGA TCTCGCGCGT GGCAGACGGG GGCCCGGTGA AAAAACACTG
GCTGACAGAG CCAGCCCATC AACGAAAGGA AGACGCTCAT GTCCGATCAA AGCTTGA
|
|---|
| Protein sequence | MHRSQQKSES EPNGQEVRSR ETRAKMIEAA IELFATVGYE AASTRALAEQ AGVNQAAIPY
HFGGKRELYL AAAQTLAEHA RERIAPIVAQ LRQAHQTDPR SVVEEALRRV FRLFASGSES
LAWVTFVIRS QYEALEGFRI IHEELAPLER ELKRVIGEAT GETDQQRLGM KLTVALAPIF
SFRPLQQFNL SVLGWDKPAP HLLDKFETVI VEAALRELFT ELPQAVDLAR GRRGPGEKTL
ADRASPSTKG RRSCPIKA
|
|---|
| |