Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3416 |
Symbol | |
ID | 3970460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3803238 |
End bp | 3804566 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637926527 |
Product | recombination factor protein RarA |
Protein accession | YP_533275 |
Protein GI | 90424905 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.384623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.14611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCGA AGCGCCCACA GCCATCGGAC AACCTGTTCG CCGCGGCGGG CATGGAGCGG GATGCGCCGC ATCCGTTGCC GGACCGGCTG CGGCCGCGCG CGCTCGAAGA CGTGGTCGGG CAGGATCACA TTCTCGGCCC CGACGGCGCG CTGACAAGGA TGCTGGAGAC CCGCACGCTC GGCTCGCTGG TGTTCTGGGG GCCGCCCGGC ACCGGCAAGA CCACGGTCGC GCGGTTGTTG GCCGACACCA CCGAACTGCA TTTCGAGCAG ATCTCCGCGG TGTTCTCCGG CGTCGCCGAT CTGAAGAAAG TGTTCGACGC CGCCCGTGCC CGCCGCCAGA CCGGCCGCGG CACGCTGTTG TTCGTCGACG AGGTGCACCG CTTCAACAAG GCGCAGCAGG ATTCCTTTCT GCCGGTGATG GAAGACGGCA CCGTGGTGCT GGTCGGCGCC ACCACCGAGA ATCCGTCGTT CGAACTCAAC GCCGCGCTGC TGTCGCGCGC GCGCGTGCTG GTGTTTCATT CGCTCGACGC GCAAGCGATC GAGAAGCTCT ACGCCCACGC CGAAACGGTG GAAGCCAAGA AGCTGCCGCT CGATGCCGAG GCGAGGGCGG TGCTGGTGCG GATGGCGGAT GGCGACGGCC GCGCCGCGCT GACGCTCGCC GAAGAGGTGT GGCGCGCCGC GCGCGCCGAT GAGGTGTTCA ACGCCGAGCA GCTGCAGGAG ATCCTGCAGC GCCGCGCGCC GATCTACGAC AAATCCGCCG ACGGCCATTA CAATCTGATT TCGGCGCTGC ATAAATCGGT GCGCGGCTCA GATCCCGATG CGGCGTTGTA CTATCTGTGC CGGATGCTCG ACGCCGGCGA AGATCCGTTG TTCCTGGCGC GCCGCGTGGT GCGGATGGCA GTCGAGGACA TTGGCCTCGC CGATCCGCAA GCGCTGGTGA TCTGCAACGC CGCCAAGGAC GCTTATGATT TCTTGGGCTC GCCCGAGGGC GAGTTGGCGA TCGCGCAGGC GGTGATTTAT CTGGCCACCG CGCCGAAATC CAACGCCGCC TACAAGGCCT ACAAGGCCGC AATGCGCGCG GCGAAGCAGG GCGGCTCGCT GCTGCCGCCG AAACACATTC TCAACGCCCC GACCAAACTG ATGAAATCCG AGGACTACGG CGCGGGCTAT CAATACGATC ACGACACCCC GGAAGGCTTT TCCGGCCAGG AGTACTTTCC CGACGCGCTC GGTCACCAGA CCTTCTACGA TCCGCCGGAC CGCGGCTTCG AGCGCGAAAT CCGCAAGCGG CTGGATTACT GGGCGAAGCT GCGCAACAGC AAAACCTAG
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Protein sequence | MSPKRPQPSD NLFAAAGMER DAPHPLPDRL RPRALEDVVG QDHILGPDGA LTRMLETRTL GSLVFWGPPG TGKTTVARLL ADTTELHFEQ ISAVFSGVAD LKKVFDAARA RRQTGRGTLL FVDEVHRFNK AQQDSFLPVM EDGTVVLVGA TTENPSFELN AALLSRARVL VFHSLDAQAI EKLYAHAETV EAKKLPLDAE ARAVLVRMAD GDGRAALTLA EEVWRAARAD EVFNAEQLQE ILQRRAPIYD KSADGHYNLI SALHKSVRGS DPDAALYYLC RMLDAGEDPL FLARRVVRMA VEDIGLADPQ ALVICNAAKD AYDFLGSPEG ELAIAQAVIY LATAPKSNAA YKAYKAAMRA AKQGGSLLPP KHILNAPTKL MKSEDYGAGY QYDHDTPEGF SGQEYFPDAL GHQTFYDPPD RGFEREIRKR LDYWAKLRNS KT
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