| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3414 |
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| Symbol | |
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| ID | 3970458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3801926 |
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| End bp | 3803017 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926525 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_533273 |
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| Protein GI | 90424903 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3591] V8-like Glu-specific endopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.204379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0483754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGG CACCCAGGAA GCCCGCGACG CCTCGGCAGC GGCGATCGCC GCGCGCCGCG
ACCCAGAGCG AGCCAGCCAG CAGCATGGCA ACAATCGAGC AGCATAAGGC GGTCTCCGAT
CCGCAGCACG ACCCGTGGGT GCTGCCGAGT TTCATGTCTG AGACCAACGG CGGCGGCTCC
GCCGAGCAGG TGCCGGGCTT CAACATCTTC CGCGCCATCA CTTCGGGATT CGAGAGCAAG
CGCGTCGCCG GTCCGACCAC CGTGCTGGCA CGGCCGGACG GTGGGTTCTT TTCCGAAGGC
ACGCCGCCGC TGTCGCCGTC CCCGCAGGCC CGCGCCTTCG CCGCCAAGCC GGAGAACGTC
ATGGGCGTCG ACAACCGCGC GATGGTGCCG GACACCTCCA CCACCCCCTG GCGCTGCATC
TGCCATCTGG AGGTGGAGTA CGAATCCGGA CCGGTGGGTT TCGGCACCGG ATTCATCATC
GGGCCGAAGG CCGTGCTGAC CGCCGCCCAC GTGATCTACA ACAACACCGG CGGCAACAAC
CGCAGGGCGC GCAACATCCG CGTCATCCCC GGCCGCAACG GAACCACCGC GCCCTATGGT
TACTTCGTGA CCAGTCTCGA CCGCTGCATC ATTCCGGAGC AGTGGCGGCA GGCCAGCGAC
ACCATCGGAG ACACCGCCGC CGCGGCGGAT TACGCCGTCA TCCAGTTTCC CGAGCAGTCG
GAGTGCGACG GGCTGACCTC GGCCGACCGG CTGGGCTATT TCGGCCTGAA ATGCTTCGCC
GACGAGGACA GCGAAAACAA GGCGCAGATG CTGTTCGTCA ACAACGCCGG CTATCCCTAC
GAGGCCGACA AGCCGTATGG AACGCTGTGG TACAATGCCG GACGCATCCG CAAAATGGGA
CCGAGCTTCG TGGAATACAT GGTCGATACC GAAGGCGGAC AGAGCGGCAG CCCGGTGTAC
TTCTACGACG ACCAAACGAA GCAACGCTAT GTGATCGCCG TGCATACCAC CGGCGATTTC
GTCAACCGCG GCCTGCGCAT CACCCCCGAG ATTTTCACCA ACCTCAAACA GTGGACCGGG
CGCTCGATCT GA
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| Protein sequence | MAQAPRKPAT PRQRRSPRAA TQSEPASSMA TIEQHKAVSD PQHDPWVLPS FMSETNGGGS
AEQVPGFNIF RAITSGFESK RVAGPTTVLA RPDGGFFSEG TPPLSPSPQA RAFAAKPENV
MGVDNRAMVP DTSTTPWRCI CHLEVEYESG PVGFGTGFII GPKAVLTAAH VIYNNTGGNN
RRARNIRVIP GRNGTTAPYG YFVTSLDRCI IPEQWRQASD TIGDTAAAAD YAVIQFPEQS
ECDGLTSADR LGYFGLKCFA DEDSENKAQM LFVNNAGYPY EADKPYGTLW YNAGRIRKMG
PSFVEYMVDT EGGQSGSPVY FYDDQTKQRY VIAVHTTGDF VNRGLRITPE IFTNLKQWTG
RSI
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