| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3348 |
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| Symbol | lipB |
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| ID | 3971062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3703517 |
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| End bp | 3704260 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637926460 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_533209 |
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| Protein GI | 90424839 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.292157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAACG ATCGCGAAAC CCTCGATTTG GTGCCGCTTT CGCTGCCGCC GGGGGCCCCG
GCCGTGGCTT GGCAAGTGTC CGATGCGCTG GTGCCCTATC CGGAGGCCAT CGCCGCGATG
GAGGCGCGGG CGGCCGCCAT CGCCGCGGGC CAGGCGCCGG AATTGGTGTG GCTCTTGGAG
CATCCGCCGC TCTACACCAG CGGCACCAGC GGCAAGGACG GCGACCTGCT CATCCCCCGC
TTCCCGCTCT ATGCCAGCGG CCGCGGCGGC CAGGTCACCT ATCACGGCCC CGGTCAAAGG
GTGGCCTATG TCATGCTCGA CCTGAAACGG CGGCGGCCGG ACGTGCGCGC CTATGTCGCC
GCGCTGGAGC AATGGATCAT CGGCACCTTG GCGCACTTCA ATGTGAGGGG CGAACGTCGC
GAGGACCGGG TCGGGGTCTG GGTGGCGCGC CCCGACAAGG GCGCAGGCTT CGAGGACAAG
ATCGCGGCGA TCGGGGTGCG GCTGCGGCGT TGGGTCTCGT TCCACGGCAT CGCCATCAAC
GTCGAACCGG ACCTCACGCA TTTTTCCGCG ATCGTGCCGT GCGGCGTCAC CGATCCGCGC
TTCGGCGTCA CCAGCCTGGT CGATCTCGGC CTCCCGGTCA CGCTGCAGGA TGTCGACGTC
GCGCTGCGGC AGGCATTCGA ACAGGTATTC GGCCCGACCG CCGACGCCGG GCTCCCAGCG
GACGACGCGG CGCTGTTGCG ATGA
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| Protein sequence | MINDRETLDL VPLSLPPGAP AVAWQVSDAL VPYPEAIAAM EARAAAIAAG QAPELVWLLE
HPPLYTSGTS GKDGDLLIPR FPLYASGRGG QVTYHGPGQR VAYVMLDLKR RRPDVRAYVA
ALEQWIIGTL AHFNVRGERR EDRVGVWVAR PDKGAGFEDK IAAIGVRLRR WVSFHGIAIN
VEPDLTHFSA IVPCGVTDPR FGVTSLVDLG LPVTLQDVDV ALRQAFEQVF GPTADAGLPA
DDAALLR
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