Gene RPC_3303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3303 
Symbol 
ID3972568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3660876 
End bp3661700 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID637926414 
Producthypothetical protein 
Protein accessionYP_533164 
Protein GI90424794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.68713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGG CCTGGCTCGA CCTCTCGACC TTCGGGACCT TTGCCACGCT CGGCATCCTT 
TATTATGGGA CGGCGCTGGC GCTGGTCGGC GTGATCTTCT TCTCGCCGCT CGGCCCGCGC
ATCAAGACGG TGAACGGCCT GGTGGCGCCG TTCTTCTCCT CGGTGGCGAT GCTGTTCGCG
CTGCTCACCG GCTTTCTCGC CAACGACGTC GGCGACCGCA ATCGGCAAGC CACGCGCGCG
GTGCAAAGCG AAGCCGGCGA GTTGCGCAAC ATCTACACGC TCAGCGTGGC GGCGGTCTCC
GACATGAAAG AGATCCGCAT CGCGCTGAAG GCCTATGCCG GCTCGGTGGT TCATGACGAA
TGGCCGGCTG TGGAAGGCGG CAGTTCGTCG CAAACCGACG CCGCTTTCGA CGAGTTGCTG
CGCCAGATCA GCGATCCCGC GATCAGCCGC CTCAACAGCA ACCCGGTGCA CGCCGCATTG
CTCAACGCCG CGGTGCGGGT CGCCACCGCA CGCGCCGTCC GGCTCAGCCT GTCGTCCGAT
CGCACCAACG ATCTGAAATG GATCTCGGTG CTGATCCTCG GCCTGATCAC CCAGGTGGCG
CTGGCGCTGG TGCATCTGGA GCGGCCGCGC GCGATGCTCG CGGCGCTGAC CGTGTTCGCC
TCCGGCGCGA TCGTGGCGCT CGGCTTGGTC GCGCTGCAGG AAGACCCGTT CGACGGCATC
TTCAAGGTGT CGCCGCAGCC GCTGGAACGA CTGCTGGCTT TGGCCGATAC GCCGGCGGTG
CCTGAGATTT TGACGAACCC GGCCGCCCTG CCCGCAGCGA AGTAA
 
Protein sequence
MIRAWLDLST FGTFATLGIL YYGTALALVG VIFFSPLGPR IKTVNGLVAP FFSSVAMLFA 
LLTGFLANDV GDRNRQATRA VQSEAGELRN IYTLSVAAVS DMKEIRIALK AYAGSVVHDE
WPAVEGGSSS QTDAAFDELL RQISDPAISR LNSNPVHAAL LNAAVRVATA RAVRLSLSSD
RTNDLKWISV LILGLITQVA LALVHLERPR AMLAALTVFA SGAIVALGLV ALQEDPFDGI
FKVSPQPLER LLALADTPAV PEILTNPAAL PAAK